The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032885921.1 | STEROL DESATURASE |
| XP_032885922.1 | STEROL DESATURASE |
| XP_032885923.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032885924.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032885925.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032885926.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032885927.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032885928.1 | TUBULIN |
| XP_032885929.1 | TUBULIN |
| XP_032885930.1 | TUBULIN |
| XP_032885931.1 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
| XP_032885932.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032885933.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032885934.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032885935.1 | NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12 |
| XP_032885936.1 | ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6 |
| XP_032885937.1 | CADHERIN-87A |
| XP_032885938.1 | SMALL INTEGRAL MEMBRANE PROTEIN 15 |
| XP_032885939.1 | NEUROPEPTIDE Y RECEPTOR |
| XP_032885940.1 | NEUROPEPTIDE Y RECEPTOR |
| XP_032885941.1 | |
| XP_032885942.1 | |
| XP_032885943.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED |
| XP_032885944.1 | FAM187 |
| XP_032885945.1 | FAM187 |
| XP_032885946.1 | FAM187 |
| XP_032885947.1 | FAM187 |
| XP_032885948.1 | FAM187 |
| XP_032885949.1 | FAM187 |
| XP_032885950.1 | DNA EXCISION REPAIR PROTEIN ERCC-8 |
| XP_032885951.1 | FAM187 |
| XP_032885952.1 | NEURALIZED |
| XP_032885953.1 | CYTOCHROME P450 26 |
| XP_032885954.1 | |
| XP_032885955.1 | TGF-BETA FAMILY |
| XP_032885956.1 | DNA EXCISION REPAIR PROTEIN ERCC-8 |
| XP_032885957.1 | CONTACTIN 5 |
| XP_032885958.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032885959.1 | CATION CHANNEL SPERM-ASSOCIATED PROTEIN 3 |
| XP_032885960.1 | FATTY ACID BINDING PROTEIN |
| XP_032885961.1 | PARANEOPLASTIC ANTIGEN |
| XP_032885962.1 | PARANEOPLASTIC ANTIGEN |
| XP_032885963.1 | ADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 2 |
| XP_032885964.1 | RALA BINDING PROTEIN 1 RALBP1 |
| XP_032885965.1 | POLYCYSTIN FAMILY MEMBER |
| XP_032885966.1 | WNT RELATED |
| XP_032885967.1 | ANION EXCHANGE PROTEIN |
| XP_032885968.1 | |
| XP_032885969.1 | ADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 2 |
| XP_032885970.1 | HOMEOBOX PROTEIN CDX |
