The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032885971.1 | NUCLEAR FACTOR NF-KAPPA-B PROTEIN |
| XP_032885972.1 | IONOTROPIC GLUTAMATE RECEPTOR |
| XP_032885973.1 | ADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 2 |
| XP_032885974.1 | CADHERIN-87A |
| XP_032885975.1 | CADHERIN-23 |
| XP_032885976.1 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| XP_032885977.1 | SEC3/SYNTAXIN-RELATED |
| XP_032885978.1 | FATTY ACID ACYL TRANSFERASE-RELATED |
| XP_032885979.1 | INTERLEUKIN-4 |
| XP_032885980.1 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 9 |
| XP_032885981.1 | DEP DOMAIN-CONTAINING |
| XP_032885982.1 | DEP DOMAIN-CONTAINING |
| XP_032885983.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032885984.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032885985.1 | OLIGOPHRENIN 1 |
| XP_032885986.1 | OLIGOPHRENIN 1 |
| XP_032885987.1 | KNIRPS-RELATED PROTEIN-RELATED |
| XP_032885988.1 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
| XP_032885989.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032885990.1 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
| XP_032885991.1 | TNFR-CYS DOMAIN-CONTAINING PROTEIN |
| XP_032885992.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032885993.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032885994.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032885995.1 | INTEGRAL TRANSMEMBRANE PROTEIN 2 |
| XP_032885996.1 | T-BOX PROTEIN-RELATED |
| XP_032885997.1 | T-BOX PROTEIN-RELATED |
| XP_032885998.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032885999.1 | CHARGED MULTIVESICULAR BODY PROTEIN |
| XP_032886000.1 | PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44 |
| XP_032886001.1 | SYNTAXIN |
| XP_032886002.1 | SYNTAXIN |
| XP_032886003.1 | WD REPEAT DOMAIN 9 |
| XP_032886004.1 | WD REPEAT DOMAIN 9 |
| XP_032886005.1 | WD REPEAT DOMAIN 9 |
| XP_032886006.1 | TRANSPOSASE |
| XP_032886007.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| XP_032886008.1 | WD REPEAT DOMAIN 9 |
| XP_032886009.1 | NONHISTONE CHROMOSOMAL PROTEIN HMG |
| XP_032886010.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| XP_032886011.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| XP_032886012.1 | LONG-CHAIN-FATTY-ACID--COA LIGASE |
| XP_032886013.1 | NUCLEAR TRANSPORT FACTOR 2 |
| XP_032886014.1 | GUANYLYL CYCLASE |
| XP_032886015.1 | WNT RELATED |
| XP_032886016.1 | WNT RELATED |
| XP_032886017.1 | DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATED |
| XP_032886018.1 | RAD54-LIKE |
| XP_032886019.1 | RAD54-LIKE |
| XP_032886020.1 | RAD54-LIKE |
