The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032885571.1 | ZINC FINGER PROTEIN 385B-LIKE |
| XP_032885572.1 | CORTACTIN AND DREBRIN |
| XP_032885573.1 | DESMOGLEIN FAMILY MEMBER |
| XP_032885574.1 | CORTACTIN AND DREBRIN |
| XP_032885575.1 | RBP-RELATED |
| XP_032885576.1 | BETA-1,4-GALACTOSYLTRANSFERASE |
| XP_032885577.1 | DOCKING PROTEIN RELATED |
| XP_032885578.1 | NEDD4-BINDING PROTEIN 3 |
| XP_032885579.1 | NEDD4-BINDING PROTEIN 3 |
| XP_032885580.1 | NEDD4-BINDING PROTEIN 3 |
| XP_032885581.1 | HOMEOBOX PROTEIN EMX-RELATED |
| XP_032885582.1 | DTDP-4-DEHYDRORHAMNOSE REDUCTASE |
| XP_032885583.1 | HYALURONAN MEDIATED MOTILITY RECEPTOR |
| XP_032885584.1 | ACROSIN-RELATED |
| XP_032885585.1 | UNCHARACTERIZED |
| XP_032885586.1 | CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED |
| XP_032885587.1 | CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED |
| XP_032885588.1 | CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED |
| XP_032885589.1 | CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED |
| XP_032885590.1 | HISTONE DEACETYLASE HDAC1-RELATED |
| XP_032885591.1 | RELT-LIKE PROTEIN 2 RELL2 |
| XP_032885592.1 | RELT-LIKE PROTEIN 2 RELL2 |
| XP_032885593.1 | RELT-LIKE PROTEIN 2 RELL2 |
| XP_032885594.1 | ACROSIN-RELATED |
| XP_032885595.1 | T-CELL IMMUNOGLOBULIN AND MUCIN DOMAIN CONTAINING TIM |
| XP_032885596.1 | ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED |
| XP_032885597.1 | ZINC FINGER HIT DOMAIN CONTAINING PROTEIN 2 PROTEIN FON -RELATED |
| XP_032885598.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032885599.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032885600.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032885601.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032885602.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032885603.1 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 |
| XP_032885604.1 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 |
| XP_032885605.1 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 |
| XP_032885606.1 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 |
| XP_032885607.1 | CYTOCHROME P450 FAMILY 4 |
| XP_032885608.1 | E3 UBIQUITIN-PROTEIN LIGASE ATL42 |
| XP_032885609.1 | PROTEIN VASCULAR ASSOCIATED DEATH 1, CHLOROPLASTIC |
| XP_032885610.1 | N-ACETYLGLUCOSAMINYLTRANSFERASE VI |
| XP_032885611.1 | SEQUESTOSOME 1-RELATED |
| XP_032885612.1 | SEQUESTOSOME 1-RELATED |
| XP_032885613.1 | SEQUESTOSOME 1-RELATED |
| XP_032885614.1 | MRN COMPLEX-INTERACTING PROTEIN |
| XP_032885615.1 | CYTOCHROME P450 FAMILY 4 |
| XP_032885616.1 | MRN COMPLEX-INTERACTING PROTEIN |
| XP_032885617.1 | CALRETICULIN AND CALNEXIN |
| XP_032885618.1 | MASTERMIND-LIKE |
| XP_032885619.1 | MICROSOMAL GLUTATHIONE S-TRANSFERASE |
| XP_032885620.1 | CADHERIN-87A |
