The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032885421.1 | AGAP005440-PA |
| XP_032885422.1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| XP_032885423.1 | B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR |
| XP_032885424.1 | M-PHASE INDUCER PHOSPHATASE DUAL SPECIFICITY PHOSPHATASE CDC25 |
| XP_032885425.1 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
| XP_032885426.1 | NEUROPEPTIDES RECEPTOR |
| XP_032885427.1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| XP_032885428.1 | WD40 REPEAT PROTEIN |
| XP_032885429.1 | SOLUTE CARRIER FAMILY 34 SODIUM PHOSPHATE , MEMBER 2-RELATED |
| XP_032885430.1 | INTERLEUKIN-12 SUBUNIT BETA-RELATED |
| XP_032885431.1 | LEUCOKININ RECEPTOR-RELATED |
| XP_032885432.1 | AMMONIUM TRANSPORTER |
| XP_032885433.1 | ZINC FINGER PROTEIN |
| XP_032885434.1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| XP_032885435.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032885436.1 | TUBULIN |
| XP_032885437.1 | TUBULIN |
| XP_032885438.1 | SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 |
| XP_032885439.1 | BAT4 PROTEIN-RELATED |
| XP_032885440.1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| XP_032885441.1 | |
| XP_032885442.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032885443.1 | SAD1/UNC-84-LIKE PROTEIN-RELATED |
| XP_032885444.1 | NXPE FAMILY MEMBER |
| XP_032885445.1 | |
| XP_032885446.1 | COMPLEXIN |
| XP_032885447.1 | COMPLEXIN |
| XP_032885448.1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| XP_032885449.1 | COMPLEXIN |
| XP_032885450.1 | COMPLEXIN |
| XP_032885451.1 | COMPLEXIN |
| XP_032885452.1 | SERINE PEPTIDASE INHIBITOR, KAZAL TYPE 2, TANDEM DUPLICATE 1-RELATED |
| XP_032885453.1 | F-BOX ONLY PROTEIN 38 |
| XP_032885454.1 | F-BOX ONLY PROTEIN 38 |
| XP_032885455.1 | F-BOX ONLY PROTEIN 38 |
| XP_032885456.1 | F-BOX ONLY PROTEIN 38 |
| XP_032885457.1 | F-BOX ONLY PROTEIN 38 |
| XP_032885458.1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| XP_032885459.1 | CASEIN KINASE-RELATED |
| XP_032885460.1 | CASEIN KINASE-RELATED |
| XP_032885461.1 | CASEIN KINASE-RELATED |
| XP_032885462.1 | TOLL-LIKE RECEPTOR |
| XP_032885463.1 | NUCLEAR FUSION PROTEIN FUS2 |
| XP_032885464.1 | NUCLEAR FUSION PROTEIN FUS2 |
| XP_032885465.1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| XP_032885466.1 | NUCLEAR FUSION PROTEIN FUS2 |
| XP_032885467.1 | NUCLEAR FUSION PROTEIN FUS2 |
| XP_032885468.1 | PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED |
| XP_032885469.1 | PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA COACTIVATOR 1 PGC-1 -RELATED |
| XP_032885470.1 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
