The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032885221.1 | TRAF-INTERACTING PROTEIN WITH FHA DOMAIN-CONTAINING PROTEIN A FAMILY MEMBER |
| XP_032885222.1 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| XP_032885223.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 |
| XP_032885224.1 | |
| XP_032885225.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032885226.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032885227.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032885228.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032885229.1 | ES1 PROTEIN HOMOLOG, MITOCHONDRIAL |
| XP_032885230.1 | PERIOSTIN-RELATED |
| XP_032885231.1 | VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37 |
| XP_032885232.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| XP_032885233.1 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| XP_032885234.1 | GOLGI MEMBRANE PROTEIN YIP1 |
| XP_032885235.1 | KNIRPS-RELATED PROTEIN-RELATED |
| XP_032885236.1 | KNIRPS-RELATED PROTEIN-RELATED |
| XP_032885237.1 | KNIRPS-RELATED PROTEIN-RELATED |
| XP_032885238.1 | OLIGOPHRENIN 1 |
| XP_032885239.1 | OLIGOPHRENIN 1 |
| XP_032885240.1 | OLIGOPHRENIN 1 |
| XP_032885241.1 | OLIGOPHRENIN 1 |
| XP_032885242.1 | OLIGOPHRENIN 1 |
| XP_032885243.1 | OLIGOPHRENIN 1 |
| XP_032885244.1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| XP_032885245.1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| XP_032885246.1 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| XP_032885247.1 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| XP_032885248.1 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| XP_032885249.1 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| XP_032885250.1 | MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3 |
| XP_032885251.1 | KINESIN-LIKE PROTEIN KLP-3 |
| XP_032885252.1 | KINESIN-LIKE PROTEIN KLP-3 |
| XP_032885253.1 | FI01459P |
| XP_032885254.1 | FI01459P |
| XP_032885255.1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| XP_032885256.1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| XP_032885257.1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| XP_032885258.1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| XP_032885259.1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| XP_032885260.1 | SMAD |
| XP_032885261.1 | SMAD |
| XP_032885262.1 | TRANSIENT RECEPTOR POTENTIAL CHANNEL |
| XP_032885263.1 | SPARC OSTEONECTIN |
| XP_032885264.1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| XP_032885265.1 | SPARC OSTEONECTIN |
| XP_032885266.1 | SPARC OSTEONECTIN |
| XP_032885267.1 | STEROL DESATURASE |
| XP_032885268.1 | KELCH PROTEIN |
| XP_032885269.1 | CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT |
| XP_032885270.1 | HOMOLOGOUS TO DROSOPHILA SQD (SQUID) PROTEIN |
