The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032884971.1 | DEOXYRIBONUCLEASE II |
| XP_032884972.1 | DEOXYRIBONUCLEASE II |
| XP_032884973.1 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4 |
| XP_032884974.1 | GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNIT |
| XP_032884975.1 | SPERMATOGENESIS-ASSOCIATED PROTEIN 1 |
| XP_032884976.1 | CANCER-RELATED REGULATOR OF ACTIN DYNAMICS |
| XP_032884977.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032884978.1 | G-PROTEIN COUPLED RECEPTOR |
| XP_032884979.1 | DI-N-ACETYLCHITOBIASE |
| XP_032884980.1 | CANCER-RELATED REGULATOR OF ACTIN DYNAMICS |
| XP_032884981.1 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
| XP_032884982.1 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
| XP_032884983.1 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
| XP_032884984.1 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
| XP_032884985.1 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
| XP_032884986.1 | AFADIN- AND ALPHA-ACTININ-BINDING PROTEIN |
| XP_032884987.1 | RHO GTPASE-ACTIVATING PROTEIN 100F |
| XP_032884988.1 | UPF0690 PROTEIN C1ORF52 |
| XP_032884989.1 | CONNECTIVE TISSUE GROWTH FACTOR-RELATED |
| XP_032884990.1 | DIMETHYLARGININE DIMETHYLAMINOHYDROLASE |
| XP_032884991.1 | BETA-ALANINE-ACTIVATING ENZYME |
| XP_032884992.1 | DIMETHYLARGININE DIMETHYLAMINOHYDROLASE |
| XP_032884993.1 | COLLAGEN ALPHA |
| XP_032884994.1 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
| XP_032884995.1 | GERANYLGERANYL TRANSFERASE TYPE BETA SUBUNIT |
| XP_032884996.1 | MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED |
| XP_032884997.1 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
| XP_032884998.1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3 |
| XP_032884999.1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3 |
| XP_032885000.1 | UNCHARACTERIZED |
| XP_032885001.1 | UNCHARACTERIZED |
| XP_032885002.1 | BETA-ALANINE-ACTIVATING ENZYME |
| XP_032885003.1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 3 |
| XP_032885004.1 | NETRIN/LAMININ-RELATED |
| XP_032885005.1 | NETRIN/LAMININ-RELATED |
| XP_032885006.1 | OLFACTOMEDIN-RELATED |
| XP_032885007.1 | PELOTA |
| XP_032885008.1 | C-U-EDITING ENZYME APOBEC-4-RELATED |
| XP_032885009.1 | BETA-ALANINE-ACTIVATING ENZYME |
| XP_032885010.1 | PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER |
| XP_032885011.1 | TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN15 |
| XP_032885012.1 | NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A |
| XP_032885013.1 | |
| XP_032885014.1 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| XP_032885015.1 | INTERCELLULAR ADHESION MOLECULE |
| XP_032885016.1 | VASCULAR CELL ADHESION MOLECULE 1 |
| XP_032885017.1 | NECTIN-RELATED |
| XP_032885018.1 | AMIDOPHOSPHORIBOSYLTRANSFERASE |
| XP_032885019.1 | OLFACTORY RECEPTOR AND ADENOSINE RECEPTOR |
| XP_032885020.1 | CRUMBS FAMILY MEMBER |
