About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf7528_0.9
PE_Scaf752_0.2
PE_Scaf7530_0.3
PE_Scaf7530_2.6BAP28
PE_Scaf7534_0.0
PE_Scaf7534_0.3
PE_Scaf7537_0.3
PE_Scaf7538_0.4AGAP011099-PA
PE_Scaf7538_0.5
PE_Scaf753_1.0
PE_Scaf753_3.0HTH CENPB-TYPE DOMAIN-CONTAINING PROTEIN
PE_Scaf753_3.1
PE_Scaf753_3.2HTH CENPB-TYPE DOMAIN-CONTAINING PROTEIN
PE_Scaf7540_0.2IMPORTIN-7, 8, 11
PE_Scaf7540_2.10
PE_Scaf7540_2.16
PE_Scaf7540_2.9DNA REPAIR/RNA PROCESSING CPSF FAMILY
PE_Scaf7542_1.5DIMETHYLANILINE MONOOXYGENASE
PE_Scaf7542_12.6
PE_Scaf7542_12.8DIMETHYLANILINE MONOOXYGENASE
PE_Scaf7542_2.4DIMETHYLANILINE MONOOXYGENASE
PE_Scaf7542_4.7DIMETHYLANILINE MONOOXYGENASE
PE_Scaf7542_4.9DIMETHYLANILINE MONOOXYGENASE
PE_Scaf7542_6.3DIMETHYLANILINE MONOOXYGENASE
PE_Scaf7542_8.0
PE_Scaf7542_9.1
PE_Scaf7542_9.3
PE_Scaf7544_0.1
PE_Scaf7544_0.2
PE_Scaf7544_0.3
PE_Scaf7545_0.0
PE_Scaf7547_1.3FER-1-LIKE
PE_Scaf7547_3.4RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1
PE_Scaf7547_3.5RECQ-MEDIATED GENOME INSTABILITY PROTEIN 2 RMI2
PE_Scaf7547_3.6
PE_Scaf7547_4.4PHD-TYPE DOMAIN-CONTAINING PROTEIN
PE_Scaf7547_4.5
PE_Scaf7547_5.13
PE_Scaf7547_5.22TIGHT JUNCTION PROTEIN
PE_Scaf7547_5.26
PE_Scaf7547_5.7
PE_Scaf7548_2.4
PE_Scaf7548_2.5
PE_Scaf7548_5.15UBIQUITIN-CONJUGATING ENZYME E2
PE_Scaf7548_5.16ALPHA-TOCOPHEROL TRANSFER PROTEIN-RELATED
PE_Scaf7548_5.17GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
PE_Scaf7549_1.0
PE_Scaf7550_0.3UNCHARACTERIZED
PE_Scaf7550_1.3RETINITIS PIGMENTOSA GTPASE REGULATOR-INTERACTING PROTEIN
PE_Scaf7551_0.0
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