About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf7430_2.6CENTROSOMAL PROTEIN POC5
PE_Scaf7430_2.7NUCLEAR HORMONE RECEPTOR HR3-RELATED
PE_Scaf7430_4.1
PE_Scaf7430_4.2SNF2/RAD54 HELICASE FAMILY
PE_Scaf7430_4.5C5ORF35
PE_Scaf7430_5.1
PE_Scaf7430_5.10
PE_Scaf7430_5.12
PE_Scaf7431_0.6NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
PE_Scaf7433_0.3
PE_Scaf7433_1.16DNA-DIRECTED RNA POLYMERASE
PE_Scaf7433_1.2
PE_Scaf7433_1.24
PE_Scaf7433_1.25
PE_Scaf7433_1.27RIBOSOME BINDING PROTEIN-1
PE_Scaf7433_1.3
PE_Scaf7433_1.4
PE_Scaf7433_1.5
PE_Scaf7433_1.6
PE_Scaf7433_1.7
PE_Scaf7433_1.8
PE_Scaf7433_1.9
PE_Scaf743_0.5ELONGATOR COMPLEX PROTEIN 5
PE_Scaf743_0.6CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4
PE_Scaf743_1.6ACTIN BUNDLING/MISSING IN METASTASIS-RELATED
PE_Scaf7440_0.7USP DOMAIN-CONTAINING PROTEIN
PE_Scaf7440_0.8
PE_Scaf7441_0.3
PE_Scaf7447_0.0
PE_Scaf7447_0.10
PE_Scaf7447_0.11
PE_Scaf744_0.0
PE_Scaf7458_0.3OS10G0105400 PROTEIN
PE_Scaf7459_0.2
PE_Scaf7459_0.4SEC14 RELATED PROTEIN
PE_Scaf745_0.3LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf7461_0.7CALPAIN
PE_Scaf7461_0.9CALPAIN
PE_Scaf7462_1.6HL01030P-RELATED
PE_Scaf7462_2.0SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED
PE_Scaf7463_0.5ADP-RIBOSYLGLYCOHYDROLASE
PE_Scaf7463_1.2PROTEIN SCAI
PE_Scaf7463_1.3GLUTAMINE SYNTHETASE
PE_Scaf7464_1.0
PE_Scaf7464_1.4SPERM PROTEIN HOMOLOG
PE_Scaf7464_2.10SPERM PROTEIN HOMOLOG
PE_Scaf7464_2.9SPLICING FACTOR 3B, SUBUNIT 1-RELATED
PE_Scaf7464_3.10
PE_Scaf7464_3.12
PE_Scaf7464_3.13
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