About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf7367_6.13STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER
PE_Scaf7368_0.0TRANSPOSON
PE_Scaf7368_0.1
PE_Scaf7369_0.2EXPORTIN 4,7-RELATED
PE_Scaf7369_1.2AMINO ACID TRANSPORTER
PE_Scaf7369_10.2IRE1-RELATED
PE_Scaf7369_12.50ZNF44 PROTEIN
PE_Scaf7369_12.51TRANSCRIPTIONAL REPRESSOR PROTEIN YY
PE_Scaf7369_12.8ZINC FINGER PROTEIN
PE_Scaf7369_2.1AMINO ACID TRANSPORTER
PE_Scaf7369_2.3AMINO ACID TRANSPORTER
PE_Scaf7369_4.1TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN
PE_Scaf7369_5.1CAT EYE SYNDROME CRITICAL REGION PROTEIN 6
PE_Scaf7369_6.2MACROPHAGE ERYTHROBLAST ATTACHER-RELATED
PE_Scaf7369_7.5UNCHARACTERIZED
PE_Scaf7369_8.3NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
PE_Scaf7373_0.0
PE_Scaf7373_0.1
PE_Scaf7373_0.3
PE_Scaf7373_0.5
PE_Scaf7375_0.1
PE_Scaf7376_3.10DESTABILASE-RELATED
PE_Scaf7376_3.6ALANYL-TRNA EDITING PROTEIN
PE_Scaf7376_3.8TIMEOUT/TIMELESS-2
PE_Scaf7376_4.3DESTABILASE-RELATED
PE_Scaf7376_4.4ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
PE_Scaf7379_0.4
PE_Scaf7379_0.5DREV PROTEIN
PE_Scaf737_0.1
PE_Scaf7380_0.0CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED
PE_Scaf7380_0.3CILIA AND FLAGELLA-ASSOCIATED PROTEIN 58-RELATED
PE_Scaf7382_1.1
PE_Scaf7382_2.12KUNITZ-TYPE PROTEASE INHIBITOR-RELATED
PE_Scaf7382_2.4
PE_Scaf7388_0.1
PE_Scaf7388_0.2
PE_Scaf7388_0.3
PE_Scaf738_0.3
PE_Scaf7390_0.0
PE_Scaf7396_0.0LORICRIN
PE_Scaf7396_0.12
PE_Scaf7396_0.7
PE_Scaf7396_1.2RABCONNECTIN-RELATED
PE_Scaf7396_1.3TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT
PE_Scaf7396_3.4
PE_Scaf7396_3.5REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED
PE_Scaf7396_3.6MONOCARBOXYLATE TRANSPORTER
PE_Scaf7398_0.0
PE_Scaf7399_0.10
PE_Scaf7399_0.13
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