About Riftia pachyptila

Riftia pachyptila, commonly known as the giant tube worm, is a marine invertebrate in the phylum Annelida. It inhabits hydrothermal vent ecosystems on the Pacific Ocean floor, where temperatures range from 2 to 30 °C. This species can tolerate extremely high hydrogen sulfide levels and relies entirely on symbiotic sulfur-oxidizing bacteria housed in its trophosome for nutrition. These worms can grow up to 3 meters in length, with tubular bodies reaching a diameter of 4 cm, making them one of the most iconic organisms in deep-sea vent ecosystems.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Riftia pachyptilaAnnelidaCold seep, Hydrothermal vent2,514 hydrothermal vent site Tica, East Pacific Rise (Alvin dive 4839, 9°50.398′N, 104°17.506′W)6426

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
-560.7MbContig2022-University of ViennaPRJNA75449399.37%25,984
-554MbContig2023-QUEEN MARY UNIVERSITY OF LONDONPRJEB5504795.60%37,037

References
TitleJournalPubmed ID
Novel Insights on Obligate Symbiont Lifestyle and Adaptation to Chemosynthetic Environment as Revealed by the Giant Tubeworm GenomeMolecular Biology and Evolution34893862
Distinct genomic routes underlie transitions to specialised symbiotic lifestyles in deep-sea annelid wormsnature communications37198188

Gene Information

<< First 345 346 347 348 349 350 351 352 353 354 Forward> Last>>        604 pages in total

Gene IDDescription
RPACG15596.1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
RPACG15597.1TOLL-LIKE RECEPTOR
RPACG15597.2
RPACG15598.1SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
RPACG15599.1
RPACG15600.1
RPACG15601.1HYR DOMAIN-CONTAINING PROTEIN
RPACG15602.1
RPACG15603.1
RPACG15604.1
RPACG15605.1
RPACG15606.1
RPACG15607.1
RPACG15608.1
RPACG15609.1
RPACG15610.1
RPACG15611.1
RPACG15612.1
RPACG15613.1
RPACG15614.1
RPACG15615.1
RPACG15616.1
RPACG15617.1
RPACG15617.2
RPACG15618.1
RPACG15619.1
RPACG15620.1
RPACG15621.1
RPACG15622.1
RPACG15623.1
RPACG15623.2
RPACG15624.1CRUMBS FAMILY MEMBER
RPACG15625.1TETRATRICOPEPTIDE REPEAT PROTEIN 5
RPACG15626.1UNCHARACTERIZED
RPACG15627.1
RPACG15628.1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
RPACG15629.1HILLARIN
RPACG15630.1SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
RPACG15631.1TRANSMEMBRANE PROTEIN 64
RPACG15632.1GPI TRANSAMIDASE COMPONENT PIG-T-RELATED
RPACG15633.1LYSINE-SPECIFIC DEMETHYLASE
RPACG15633.2
RPACG15634.1-
RPACG15635.1
RPACG15636.1
RPACG15637.1
RPACG15638.1
RPACG15639.1
RPACG15640.1
RPACG15641.1-
TOP