The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g3361 | SELECTIN LIGAND RELATED |
| MBSQW58_g3362 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| MBSQW58_g3363 | |
| MBSQW58_g3364 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| MBSQW58_g3365 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| MBSQW58_g3366 | |
| MBSQW58_g3367 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| MBSQW58_g3368 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| MBSQW58_g3369 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| MBSQW58_g337 | L-THREONINE 3-DEHYDROGENASE |
| MBSQW58_g3370 | CARBOHYDRATE SULFOTRANSFERASE |
| MBSQW58_g3371 | CARBOHYDRATE SULFOTRANSFERASE |
| MBSQW58_g3372 | PROTEIN C20ORF24 RAB5-INTERACTING PROTEIN |
| MBSQW58_g3373 | RETINOL DEHYDROGENASE |
| MBSQW58_g3374 | RETINOL DEHYDROGENASE |
| MBSQW58_g3375 | |
| MBSQW58_g3376 | |
| MBSQW58_g3377 | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED |
| MBSQW58_g3378 | - |
| MBSQW58_g3379 | VOLTAGE-GATED POTASSIUM CHANNEL |
| MBSQW58_g338 | LEPRECAN 1 |
| MBSQW58_g3380 | MITOGEN-ACTIVATED PROTEIN KINASE |
| MBSQW58_g3381 | MITOGEN-ACTIVATED PROTEIN KINASE |
| MBSQW58_g3382 | LYR MOTIF-CONTAINING PROTEIN 9 |
| MBSQW58_g3383 | PURPLE ACID PHOSPHATASE |
| MBSQW58_g3384 | MYOTUBULARIN-RELATED |
| MBSQW58_g3385 | SERINE/THREONINE-PROTEIN KINASE TAO1-LIKE PROTEIN |
| MBSQW58_g3386 | |
| MBSQW58_g3387 | |
| MBSQW58_g3388 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g3389 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g339 | PROTEIN LYSINE HYDROXYLATION COMPLEX COMPONENT |
| MBSQW58_g3390 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g3391 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g3392 | |
| MBSQW58_g3393 | SULFATE TRANSPORTER |
| MBSQW58_g3394 | LIM DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g3395 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| MBSQW58_g3396 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| MBSQW58_g3397 | RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6 |
| MBSQW58_g3398 | REVERSE TRANSCRIPTASE |
| MBSQW58_g3399 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g34 | BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATED |
| MBSQW58_g340 | BETA TRANSDUCIN-RELATED PROTEIN |
| MBSQW58_g3400 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
| MBSQW58_g3401 | RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED |
| MBSQW58_g3402 | CHAPERONIN |
| MBSQW58_g3403 | NITRIC OXIDE SYNTHASE-RELATED |
| MBSQW58_g3404 | RH59310P |
| MBSQW58_g3405 |
