The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g3271 | HYCCIN RELATED |
| MBSQW58_g3272 | |
| MBSQW58_g3273 | |
| MBSQW58_g3274 | |
| MBSQW58_g3275 | COLLAGEN ALPHA |
| MBSQW58_g3276 | NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNIT |
| MBSQW58_g3277 | VESICLE-TRAFFICKING PROTEIN SEC22B |
| MBSQW58_g3278 | |
| MBSQW58_g3279 | |
| MBSQW58_g328 | SET DOMAIN-CONTAINING PROTEIN-RELATED |
| MBSQW58_g3280 | TUMOR ENDOTHELIAL MARKER 7 RELATED |
| MBSQW58_g3281 | UREASE |
| MBSQW58_g3282 | UREASE ACCESSORY PROTEIN G |
| MBSQW58_g3283 | ACYL-COA DEHYDROGENASE |
| MBSQW58_g3284 | |
| MBSQW58_g3285 | |
| MBSQW58_g3286 | POLYCYSTIN FAMILY MEMBER |
| MBSQW58_g3287 | RAB FAMILY |
| MBSQW58_g3288 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g3289 | TESTIS-EXPRESSED PROTEIN 264 |
| MBSQW58_g329 | GOLGI MEMBRANE PROTEIN YIP1 |
| MBSQW58_g3290 | |
| MBSQW58_g3291 | F-BOX ONLY PROTEIN 6-LIKE PROTEIN |
| MBSQW58_g3292 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| MBSQW58_g3293 | |
| MBSQW58_g3294 | |
| MBSQW58_g3295 | |
| MBSQW58_g3296 | HYR DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g3297 | TESTIS, PROSTATE AND PLACENTA-EXPRESSED PROTEIN |
| MBSQW58_g3298 | BLR2807 PROTEIN |
| MBSQW58_g3299 | ORGANIC ANION TRANSPORTER |
| MBSQW58_g33 | BINDING OXIDOREDUCTASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G17690)-RELATED |
| MBSQW58_g330 | LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN |
| MBSQW58_g3300 | UBIQUITINATION FACTOR E4 |
| MBSQW58_g3301 | SOLUTE CARRIER FAMILY 35 |
| MBSQW58_g3302 | UNCHARACTERIZED |
| MBSQW58_g3303 | WNT RELATED |
| MBSQW58_g3304 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| MBSQW58_g3305 | WNT RELATED |
| MBSQW58_g3306 | ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE |
| MBSQW58_g3307 | |
| MBSQW58_g3308 | |
| MBSQW58_g3309 | ATP-DEPENDENT DNA HELICASE |
| MBSQW58_g331 | REELIN |
| MBSQW58_g3310 | BILIVERDIN REDUCTASE A |
| MBSQW58_g3311 | MAKORIN-RELATED |
| MBSQW58_g3312 | PAR-6-RELATED |
| MBSQW58_g3313 | 1,4-ALPHA-GLUCAN-BRANCHING ENZYME |
| MBSQW58_g3314 | IKB KINASE |
| MBSQW58_g3315 | IKB KINASE |
