The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g3091 | |
| MBSQW58_g3092 | SYNDROMES PUTATIVE CHAPERONIN-RELATED |
| MBSQW58_g3093 | TRIOKINASE/FMN CYCLASE |
| MBSQW58_g3094 | |
| MBSQW58_g3095 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| MBSQW58_g3096 | |
| MBSQW58_g3097 | DNAJ HOMOLOG SUBFAMILY C MEMBER 9 |
| MBSQW58_g3098 | |
| MBSQW58_g3099 | |
| MBSQW58_g31 | |
| MBSQW58_g310 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 |
| MBSQW58_g3100 | |
| MBSQW58_g3101 | |
| MBSQW58_g3102 | |
| MBSQW58_g3103 | |
| MBSQW58_g3104 | TETRATRICOPEPTIDE REPEAT PROTEIN 23 |
| MBSQW58_g3105 | |
| MBSQW58_g3106 | PHOSPHOTRIESTERASE-RELATED |
| MBSQW58_g3107 | HELICASE RELATED |
| MBSQW58_g3108 | |
| MBSQW58_g3109 | COILED-COIL DOMAIN-CONTAINING PROTEIN 97 |
| MBSQW58_g311 | TRANSFERASE, PUTATIVE-RELATED |
| MBSQW58_g3110 | 2-5 OLIGOADENYLATE SYNTHETASE |
| MBSQW58_g3111 | 2-5 OLIGOADENYLATE SYNTHETASE |
| MBSQW58_g3112 | WD REPEAT-CONTAINING PROTEIN 61 |
| MBSQW58_g3113 | 2-5 OLIGOADENYLATE SYNTHETASE |
| MBSQW58_g3114 | HYALURONIDASE |
| MBSQW58_g3115 | HYALURONIDASE |
| MBSQW58_g3116 | HYALURONIDASE |
| MBSQW58_g3117 | 2-5 OLIGOADENYLATE SYNTHETASE |
| MBSQW58_g3118 | |
| MBSQW58_g3119 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| MBSQW58_g312 | SODIUM-GLUCOSE COTRANSPORTER REGULATORY PROTEIN -RELATED |
| MBSQW58_g3120 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| MBSQW58_g3121 | PULMONARY SURFACTANT-ASSOCIATED PROTEIN A |
| MBSQW58_g3122 | SULFOTRANSFERASE SULT |
| MBSQW58_g3123 | SULFOTRANSFERASE SULT |
| MBSQW58_g3124 | |
| MBSQW58_g3125 | HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26 |
| MBSQW58_g3126 | HOMEOBOX PROTEIN PROSPERO/PROX-1/CEH-26 |
| MBSQW58_g3127 | IONOTROPIC GLUTAMATE RECEPTOR |
| MBSQW58_g3128 | OPTIC ATROPHY 3 PROTEIN OPA3 |
| MBSQW58_g3129 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| MBSQW58_g313 | COPINE FAMILY PROTEIN 1 |
| MBSQW58_g3130 | |
| MBSQW58_g3131 | RIBONUCLEASE Y |
| MBSQW58_g3132 | PRE-MRNA SPLICING FACTOR |
| MBSQW58_g3133 | UNCHARACTERIZED |
| MBSQW58_g3134 | SOLUTE CARRIER FAMILY 35 MEMBER B |
| MBSQW58_g3135 | PROTEASOME SUBUNIT ALPHA/BETA |
