About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS15151UBIQUITIN-CONJUGATING ENZYME E2
HS15152R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG
HS15153
HS15154REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15155SMALL NUCLEAR RIBONUCLEOPROTEIN-ASSOCIATED PROTEIN B AND N
HS15156SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE
HS15157UNCHARACTERIZED
HS15158POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4
HS15159ATP-DEPENDENT RNA HELICASE RHLE-RELATED
HS15160
HS15161PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
HS15162REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15163-
HS15164GLUTAMATE RECEPTOR-INTERACTING PROTEIN GRIP
HS15165SODIUM/CHLORIDE DEPENDENT TRANSPORTER
HS15166REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15167U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3
HS15168HISTONE H2B
HS15169STRIATED MUSCLE ACTIVATOR OF RHO-DEPENDENT SIGNALING-RELATED
HS15170REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN
HS1517114-3-3 PROTEIN
HS15172E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS15173DEOXYRIBONUCLEASE
HS15174
HS15175TRANSLATION MACHINERY-ASSOCIATED PROTEIN 7
HS15176COILED-COIL DOMAIN-CONTAINING PROTEIN 51
HS15177PROTEIN CBG05349
HS15178HIGH MOBILITY GROUP PROTEIN DSP1
HS15179ACTIN BUNDLING/MISSING IN METASTASIS-RELATED
HS15180E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS15181E3 UBIQUITIN-PROTEIN LIGASE TRIM
HS15182MYC PROTO-ONCOGENE
HS15183
HS15184ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN
HS15185HOMEOBOX EXPRESSED IN ES CELLS 1
HS15186CYTOCHROME C1
HS15187HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN
HS15188PHOSPHOENOLPYRUVATE CARBOXYKINASE
HS15189ADENOSYLHOMOCYSTEINASE
HS15190CHARGED MULTIVESICULAR BODY PROTEIN
HS15191LOW DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING 4A
HS15192CYCLIN D1-BINDING PROTEIN 1
HS15193PROTEIN-GLUTAMINE GAMMA-GLUTAMYLTRANSFERASE
HS15194RNA (RNA) POLYMERASE II ASSOCIATED PROTEIN HOMOLOG
HS15195JITTERBUG, ISOFORM N
HS15196REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
HS15197CENTROSOMAL PROTEIN OF 170 KDA
HS15198UNCHARACTERIZED
HS15199
HS15200ADP RIBOSYLATION FACTOR-RELATED
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