The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032882371.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| XP_032882372.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| XP_032882373.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| XP_032882374.1 | EXOCYST COMPLEX COMPONENT SEC6-RELATED |
| XP_032882375.1 | |
| XP_032882376.1 | |
| XP_032882377.1 | |
| XP_032882378.1 | |
| XP_032882379.1 | ANAPHASE PROMOTING COMPLEX SUBUNIT 4 APC4 |
| XP_032882380.1 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| XP_032882381.1 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| XP_032882382.1 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| XP_032882383.1 | MYOTONIC DYSTROPHY S/T KINASE-RELATED |
| XP_032882384.1 | ANKYRIN DOMAIN-CONTAINING |
| XP_032882385.1 | RUBY-EYE2-LIKE PROTEIN |
| XP_032882386.1 | RUBY-EYE2-LIKE PROTEIN |
| XP_032882387.1 | RUBY-EYE2-LIKE PROTEIN |
| XP_032882388.1 | ZINC FINGER PROTEIN 839 |
| XP_032882389.1 | ZINC FINGER PROTEIN 839 |
| XP_032882390.1 | CYCLIN-DEPENDENT KINASE 2-INTERACTING PROTEIN |
| XP_032882391.1 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| XP_032882392.1 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| XP_032882393.1 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| XP_032882394.1 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| XP_032882395.1 | SPHINGOLIPID DELTA 4 DESATURASE/C-4 HYDROXYLASE PROTEIN DES2 |
| XP_032882396.1 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
| XP_032882397.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032882398.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032882399.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032882400.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032882401.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032882402.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032882403.1 | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED |
| XP_032882404.1 | TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN |
| XP_032882405.1 | TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN |
| XP_032882406.1 | PROTEIN SEL-1 HOMOLOG 3 |
| XP_032882407.1 | TRYPTOPHANYL-TRNA SYNTHETASE |
| XP_032882408.1 | TRYPTOPHANYL-TRNA SYNTHETASE |
| XP_032882409.1 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| XP_032882410.1 | NOTCH LIGAND FAMILY MEMBER |
| XP_032882411.1 | IODOTHYRONINE DEIODINASE |
| XP_032882412.1 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
| XP_032882413.1 | PROTEIN SEL-1 HOMOLOG 3 |
| XP_032882414.1 | SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B |
| XP_032882415.1 | MALE FERTILITY FACTOR KL5 |
| XP_032882416.1 | MALE FERTILITY FACTOR KL5 |
| XP_032882417.1 | MALE FERTILITY FACTOR KL5 |
| XP_032882418.1 | MALE FERTILITY FACTOR KL5 |
| XP_032882419.1 | |
| XP_032882420.1 |
