The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032882521.1 | COILED-COIL DOMAIN CONTAINING PROTEIN 9 |
| XP_032882522.1 | A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATED |
| XP_032882523.1 | T-BOX PROTEIN-RELATED |
| XP_032882524.1 | T-BOX PROTEIN-RELATED |
| XP_032882525.1 | T-BOX PROTEIN-RELATED |
| XP_032882526.1 | T-BOX PROTEIN-RELATED |
| XP_032882527.1 | TBC1 DOMAIN FAMILY MEMBER 19 |
| XP_032882528.1 | |
| XP_032882529.1 | |
| XP_032882530.1 | |
| XP_032882531.1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| XP_032882532.1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| XP_032882533.1 | N-ACETYLGALACTOSAMINYLTRANSFERASE |
| XP_032882534.1 | SWAP-70 RECOMBINASE |
| XP_032882535.1 | SWAP-70 RECOMBINASE |
| XP_032882536.1 | TBC1 DOMAIN FAMILY MEMBER 19 |
| XP_032882537.1 | |
| XP_032882538.1 | |
| XP_032882539.1 | SOLUTE CARRIER FAMILY 39 ZINC TRANSPORTER , MEMBER 9-RELATED |
| XP_032882540.1 | MITOGEN-ACTIVATED PROTEIN KINASE-BINDING PROTEIN 1 |
| XP_032882541.1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED |
| XP_032882542.1 | TYROSINE-PROTEIN KINASE RECEPTOR |
| XP_032882543.1 | PLEKHH PROTEIN |
| XP_032882544.1 | STROMAL INTERACTION MOLECULE HOMOLOG |
| XP_032882545.1 | PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H |
| XP_032882546.1 | PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT H |
| XP_032882547.1 | CCCH ZINC FINGER/TIS11-RELATED |
| XP_032882548.1 | CCCH ZINC FINGER/TIS11-RELATED |
| XP_032882549.1 | DNA REPAIR PROTEIN RAD51 HOMOLOG 2 |
| XP_032882550.1 | STROMAL INTERACTION MOLECULE HOMOLOG |
| XP_032882551.1 | TRANSMEMBRANE PROTEIN 229 FAMILY MEMBER |
| XP_032882552.1 | TRANSMEMBRANE PROTEIN 229 FAMILY MEMBER |
| XP_032882553.1 | TRANSMEMBRANE PROTEIN 229 FAMILY MEMBER |
| XP_032882554.1 | TRANSMEMBRANE PROTEIN 229 FAMILY MEMBER |
| XP_032882555.1 | TRANSMEMBRANE PROTEIN 229 FAMILY MEMBER |
| XP_032882556.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| XP_032882557.1 | METASTASIS-ASSOCIATED PROTEIN AND MESODERM INDUCTION EARLY RESPONSE PROTEIN |
| XP_032882558.1 | DYNEIN REGULATORY COMPLEX SUBUNIT 7 |
| XP_032882559.1 | DYNEIN REGULATORY COMPLEX SUBUNIT 7 |
| XP_032882560.1 | DYNEIN REGULATORY COMPLEX SUBUNIT 7 |
| XP_032882561.1 | DYNEIN REGULATORY COMPLEX SUBUNIT 7 |
| XP_032882562.1 | CADHERIN-87A |
| XP_032882563.1 | SMALL KINETOCHORE-ASSOCIATED PROTEIN |
| XP_032882564.1 | KINETOCHORE SCAFFOLD 1 |
| XP_032882565.1 | KINETOCHORE SCAFFOLD 1 |
| XP_032882566.1 | KINETOCHORE SCAFFOLD 1 |
| XP_032882567.1 | KINETOCHORE SCAFFOLD 1 |
| XP_032882568.1 | KINETOCHORE SCAFFOLD 1 |
| XP_032882569.1 | RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER |
| XP_032882570.1 | RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER |
