The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032882271.1 | MICRORNA PROCESSOR COMPLEX SUBUNIT DGCR8 |
| XP_032882272.1 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| XP_032882273.1 | INTERPHOTORECEPTOR MATRIX PROTEOGLYCAN |
| XP_032882274.1 | PARANEOPLASTIC ANTIGEN |
| XP_032882275.1 | SOLUTE CARRIER FAMILY 22 MEMBER |
| XP_032882276.1 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 33 |
| XP_032882277.1 | ZGC:174356 |
| XP_032882278.1 | CATION CHANNEL SPERM-ASSOCIATED PROTEIN SUBUNIT DELTA-RELATED |
| XP_032882279.1 | UNCHARACTERIZED |
| XP_032882280.1 | WD REPEAT-CONTAINING PROTEIN 27 |
| XP_032882281.1 | SPECTRIN REPEAT CONTAINING NUCLEAR ENVELOPE PROTEIN 2 |
| XP_032882282.1 | ENDONUCLEASE DOMAIN-CONTAINING 1 PROTEIN ENDOD1 |
| XP_032882283.1 | LEUCOKININ RECEPTOR-RELATED |
| XP_032882284.1 | GLUCAGON-FAMILY NEUROPEPTIDE |
| XP_032882285.1 | GLUCAGON-FAMILY NEUROPEPTIDE |
| XP_032882286.1 | GLUCAGON-FAMILY NEUROPEPTIDE |
| XP_032882287.1 | UNCHARACTERIZED |
| XP_032882288.1 | C2H2 ZINC FINGER CGI-62-RELATED |
| XP_032882289.1 | ZGC:162509 |
| XP_032882290.1 | |
| XP_032882291.1 | ZGC:162509 |
| XP_032882292.1 | |
| XP_032882293.1 | INTERFERON-INDUCIBLE GTPASE |
| XP_032882294.1 | INTERFERON-INDUCIBLE GTPASE |
| XP_032882295.1 | UNCHARACTERIZED |
| XP_032882296.1 | IMMUNOGLOBULIN LIGHT CHAIN |
| XP_032882297.1 | T-CELL RECEPTOR GAMMA CHAIN |
| XP_032882298.1 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| XP_032882299.1 | IMMUNOGLOBULIN LIGHT CHAIN |
| XP_032882300.1 | IMMUNOGLOBULIN HEAVY CHAIN |
| XP_032882301.1 | T-CELL RECEPTOR GAMMA CHAIN |
| XP_032882302.1 | |
| XP_032882303.1 | |
| XP_032882304.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032882305.1 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN |
| XP_032882306.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032882307.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032882308.1 | METABOTROPIC GLUTAMATE RECEPTOR |
| XP_032882309.1 | HEPARAN SULFATE 2-O-SULFOTRANSFERASE |
| XP_032882310.1 | RAB GDP/GTP EXCHANGE FACTOR |
| XP_032882311.1 | CHONDROLECTIN VARIANT CHODLFDELTAE. |
| XP_032882312.1 | PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN |
| XP_032882313.1 | CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE |
| XP_032882314.1 | SEL-1-LIKE PROTEIN |
| XP_032882315.1 | CHAPERONIN |
| XP_032882316.1 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
| XP_032882317.1 | ATP-BINDING CASSETTE, SUB-FAMILY H, MEMBER 1 |
| XP_032882318.1 | |
| XP_032882319.1 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| XP_032882320.1 | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS |
