The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032882171.1 | L-ASPARAGINASE |
| XP_032882172.1 | UNCHARACTERIZED |
| XP_032882173.1 | UNCHARACTERIZED |
| XP_032882174.1 | SLIT HOMOLOG |
| XP_032882175.1 | AGAP008170-PA |
| XP_032882176.1 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| XP_032882177.1 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
| XP_032882178.1 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
| XP_032882179.1 | OTORAPLIN |
| XP_032882180.1 | NUCLEAR PORE COMPLEX PROTEIN NUP133 |
| XP_032882181.1 | UNCHARACTERIZED |
| XP_032882182.1 | UNCHARACTERIZED |
| XP_032882183.1 | PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED |
| XP_032882184.1 | PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED |
| XP_032882185.1 | PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED |
| XP_032882186.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| XP_032882187.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| XP_032882188.1 | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL |
| XP_032882189.1 | COMM DOMAIN-CONTAINING PROTEIN 1 |
| XP_032882190.1 | COMM DOMAIN-CONTAINING PROTEIN 1 |
| XP_032882191.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032882192.1 | PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED |
| XP_032882193.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032882194.1 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032882195.1 | |
| XP_032882196.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| XP_032882197.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| XP_032882198.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| XP_032882199.1 | CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED |
| XP_032882200.1 | HOMEOBOX PROTEIN |
| XP_032882201.1 | HOMEOBOX PROTEIN |
| XP_032882202.1 | HOMOLOC-13 |
| XP_032882203.1 | HOMOLOC-13 |
| XP_032882204.1 | MALATE DEHYDROGENASE |
| XP_032882205.1 | VACUOLAR PROTEIN SORTING 54 |
| XP_032882206.1 | VACUOLAR PROTEIN SORTING 54 |
| XP_032882207.1 | VACUOLAR PROTEIN SORTING 54 |
| XP_032882208.1 | VACUOLAR PROTEIN SORTING 54 |
| XP_032882209.1 | - |
| XP_032882210.1 | - |
| XP_032882211.1 | - |
| XP_032882212.1 | E3 UBIQUITIN-PROTEIN LIGASE PELLINO-RELATED |
| XP_032882213.1 | CALCIUM BINDING PROTEINS |
| XP_032882214.1 | E3 UBIQUITIN-PROTEIN LIGASE PELLINO-RELATED |
| XP_032882215.1 | GALECTIN |
| XP_032882216.1 | GALECTIN |
| XP_032882217.1 | AFTIPHILIN A-RELATED |
| XP_032882218.1 | CELL DIVISION CYCLE ASSOCIATED PROTEIN 4/SERTA DOMAIN-CONTAINING PROTEIN 2 |
| XP_032882219.1 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| XP_032882220.1 | SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
