The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032881971.1 | |
| XP_032881972.1 | NUCLEOSIDE DIPHOSPHATE KINASE 6 |
| XP_032881973.1 | L-GULONOLACTONE OXIDASE |
| XP_032881974.1 | L-GULONOLACTONE OXIDASE |
| XP_032881975.1 | |
| XP_032881976.1 | |
| XP_032881977.1 | CONDENSIN COMPLEX SUBUNIT 3-RELATED |
| XP_032881978.1 | |
| XP_032881979.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032881980.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032881981.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032881982.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032881983.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032881984.1 | PAPILLOMAVIRUS REGULATORY FACTOR PRF-1 |
| XP_032881985.1 | PAPILLOMAVIRUS REGULATORY FACTOR PRF-1 |
| XP_032881986.1 | PAPILLOMAVIRUS REGULATORY FACTOR PRF-1 |
| XP_032881987.1 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
| XP_032881988.1 | DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER |
| XP_032881989.1 | TRANSCRIPTION FACTOR MLR1/2 |
| XP_032881990.1 | STATHMIN |
| XP_032881991.1 | STATHMIN |
| XP_032881992.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032881993.1 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| XP_032881994.1 | FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER |
| XP_032881995.1 | TRANSCRIPTION FACTOR MLR1/2 |
| XP_032881996.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11 |
| XP_032881997.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11 |
| XP_032881998.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11 |
| XP_032881999.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 11 |
| XP_032882000.1 | NADPH NITROREDUCTASE |
| XP_032882001.1 | NADPH NITROREDUCTASE |
| XP_032882002.1 | PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE |
| XP_032882003.1 | TRANSCRIPTION FACTOR MLR1/2 |
| XP_032882004.1 | ANDROGLOBIN |
| XP_032882005.1 | ANDROGLOBIN |
| XP_032882006.1 | RAB FAMILY |
| XP_032882007.1 | RAB FAMILY |
| XP_032882008.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| XP_032882009.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| XP_032882010.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| XP_032882011.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| XP_032882012.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| XP_032882013.1 | TRANSCRIPTION FACTOR MLR1/2 |
| XP_032882014.1 | LETHAL 2 GIANT LARVAE PROTEIN |
| XP_032882015.1 | SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED |
| XP_032882016.1 | SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED |
| XP_032882017.1 | SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED |
| XP_032882018.1 | SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED |
| XP_032882019.1 | SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED |
| XP_032882020.1 | SAM-DOMAIN, SH3 AND NUCLEAR LOCALIZATION SIGNALS PROTEIN RELATED |
