About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf1064_0.0BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
PE_Scaf1064_4.4UNCHARACTERIZED
PE_Scaf1064_7.10VOLTAGE-GATED CATION CHANNEL CALCIUM AND SODIUM
PE_Scaf10650_0.2
PE_Scaf10657_0.2
PE_Scaf10657_10.3
PE_Scaf10657_10.4UBIQUITIN-LIKE-CONJUGATING ENZYME ATG10
PE_Scaf10657_11.4SINGLE STRANDED DNA BINDING PROTEIN
PE_Scaf10657_12.6ANNEXIN
PE_Scaf10657_12.7MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10
PE_Scaf10657_13.9DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
PE_Scaf10657_14.4JUN TRANSCRIPTION FACTOR-RELATED
PE_Scaf10657_14.5TROPOMODULIN
PE_Scaf10657_15.28TUBULIN
PE_Scaf10657_15.29
PE_Scaf10657_15.6FTP DOMAIN-CONTAINING PROTEIN
PE_Scaf10657_15.7RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
PE_Scaf10657_2.4NAZO FAMILY MEMBER
PE_Scaf10657_4.3
PE_Scaf10657_4.4
PE_Scaf10657_5.5
PE_Scaf10657_7.1
PE_Scaf10657_7.3
PE_Scaf10657_7.9
PE_Scaf10657_9.6
PE_Scaf10657_9.7
PE_Scaf10658_0.12EXPRESSED PROTEIN
PE_Scaf10658_0.13DYNACTIN SUBUNIT
PE_Scaf10658_0.14SERINE/THREONINE-PROTEIN KINASE 16
PE_Scaf10658_0.15DELETED IN LUNG AND ESOPHAGEAL CANCER PROTEIN 1
PE_Scaf10659_0.4PROTEIN INTURNED
PE_Scaf10660_0.0
PE_Scaf10660_0.2
PE_Scaf10660_0.5
PE_Scaf10662_0.0
PE_Scaf10662_0.1
PE_Scaf10664_0.1
PE_Scaf10665_0.0
PE_Scaf10665_0.2
PE_Scaf10666_0.0
PE_Scaf10666_0.8
PE_Scaf10666_0.9CYSTEINE-RICH SECRETORY PROTEIN-RELATED
PE_Scaf10668_0.1
PE_Scaf10668_0.3LIPASE
PE_Scaf1066_0.0
PE_Scaf1066_0.7
PE_Scaf10671_0.2
PE_Scaf10672_1.0
PE_Scaf10674_0.0
PE_Scaf10678_0.3TRANSMEMBRANE CHANNEL-RELATED
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