About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf10622_4.4TSC22
PE_Scaf10622_4.7POTASSIUM/PROTON ANTIPORTER-RELATED
PE_Scaf10624_2.0
PE_Scaf10624_2.12HOMEOBOX PROTEIN
PE_Scaf10629_0.0
PE_Scaf10629_0.2
PE_Scaf10629_0.5
PE_Scaf10631_0.4
PE_Scaf10631_0.5PHD/F-BOX CONTAINING PROTEIN
PE_Scaf10636_1.1
PE_Scaf10636_11.3SOLUTE CARRIER FAMILY 13 MEMBER
PE_Scaf10636_15.4N-LYSINE METHYLTRANSFERASE KMT5A
PE_Scaf10636_16.4UNCHARACTERIZED
PE_Scaf10636_16.6RETINOVIN-RELATED
PE_Scaf10636_9.3
PE_Scaf10639_1.4ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1
PE_Scaf10639_2.0
PE_Scaf10639_2.2BLOC-1 COMPLEX SUBUNIT 1
PE_Scaf10639_3.2INTEGRIN ALPHA
PE_Scaf10639_4.4PYM PROTEIN
PE_Scaf10639_5.3
PE_Scaf10639_7.10
PE_Scaf10639_7.6RIIA DOMAIN-CONTAINING PROTEIN 1
PE_Scaf10639_7.7
PE_Scaf10639_7.9BETA1,3-GALACTOSYLTRANSFERASE
PE_Scaf1063_0.1UDP/ADP-SUGAR PYROPHOSPHATASE
PE_Scaf10640_0.0
PE_Scaf10640_0.6
PE_Scaf10641_1.1
PE_Scaf10641_1.3
PE_Scaf10641_1.8VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
PE_Scaf10641_2.3GH11727P
PE_Scaf10641_2.4TESTIS-EXPRESSED PROTEIN 52
PE_Scaf10641_3.13FANCONI ANEMIA GROUP E PROTEIN
PE_Scaf10641_3.8
PE_Scaf10641_6.3MAP-KINASE ACTIVATING DEATH DOMAIN PROTEIN MADD /DENN/AEX-3 C.ELEGANS
PE_Scaf10641_8.1DUAL SPECIFICITY PROTEIN KINASE
PE_Scaf10641_9.5HEPARAN SULFATE SULFOTRANSFERASE
PE_Scaf10641_9.6
PE_Scaf10642_0.2FTP DOMAIN-CONTAINING PROTEIN
PE_Scaf10642_1.6
PE_Scaf10643_0.0
PE_Scaf10643_0.1
PE_Scaf10644_2.0
PE_Scaf10644_2.3
PE_Scaf10644_4.1
PE_Scaf10644_4.5GOLGI REASSEMBLY STACKING PROTEIN GRASP
PE_Scaf10646_3.4OVOCHYMASE-RELATED
PE_Scaf10646_3.6OVOCHYMASE-RELATED
PE_Scaf10647_0.0
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