About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf10516_0.6DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 2
PE_Scaf10519_0.7FTP DOMAIN-CONTAINING PROTEIN
PE_Scaf10519_0.9
PE_Scaf10521_1.4KINESIN LIGHT CHAIN
PE_Scaf10521_2.0
PE_Scaf10521_2.4UBIQUINOL-CYTOCHROME-C REDUCTASE COMPLEX ASSEMBLY FACTOR 2
PE_Scaf10521_3.4
PE_Scaf10521_4.6RAD54-LIKE
PE_Scaf10521_4.7ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL
PE_Scaf10521_4.8LD33804P
PE_Scaf10525_1.6NG5
PE_Scaf10525_2.0
PE_Scaf10525_2.4
PE_Scaf10525_4.0
PE_Scaf10525_6.2
PE_Scaf10525_7.14KELCH DOMAIN-CONTAINING PROTEIN
PE_Scaf10525_7.15
PE_Scaf10525_7.16KELCH DOMAIN-CONTAINING PROTEIN
PE_Scaf10525_7.18
PE_Scaf10527_0.10
PE_Scaf10527_0.12SI:CH211-262H13.3-RELATED-RELATED
PE_Scaf10527_0.9
PE_Scaf1052_0.7
PE_Scaf10532_1.6
PE_Scaf10532_1.7CYTOCHROME C OXIDASE SUBUNIT IV
PE_Scaf10532_2.6PHOSPHOLIPID ACYLTRANSFERASE
PE_Scaf10532_3.10
PE_Scaf10532_3.7
PE_Scaf10532_3.8
PE_Scaf10532_3.9
PE_Scaf10532_4.3WD40 PROTEIN CIAO1
PE_Scaf10532_5.0
PE_Scaf10532_5.11PROTRUDIN
PE_Scaf10532_5.15SERINE/THREONINE-PROTEIN KINASE IAL-RELATED
PE_Scaf10532_5.17PALMITOYLTRANSFERASE ZDHHC16
PE_Scaf10532_5.9SH3-BINDING
PE_Scaf10534_0.0
PE_Scaf10534_0.2
PE_Scaf10535_0.1
PE_Scaf10535_0.5POLYGLUTAMINE BINDING PROTEIN 1/MARVEL MEMBRANE-ASSOCIATING DOMAIN CONTAINING 3
PE_Scaf10535_0.6WINS1, 2 PROTEIN
PE_Scaf10535_1.10OSTEOCLAST-STIMULATING FACTOR 1
PE_Scaf10535_1.1140S RIBOSOMAL PROTEIN S17
PE_Scaf10535_1.3
PE_Scaf10536_0.1
PE_Scaf10537_0.2PROTEIN HID1
PE_Scaf10537_0.5PROTEIN HID1
PE_Scaf10538_0.2
PE_Scaf10540_0.2DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
PE_Scaf10541_1.2GLUTATHIONE S-TRANSFERASE
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