The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g20799 | HMG DOMAIN-CONTAINING PROTEIN 4 |
| MBSQW58_g208 | TUBULIN |
| MBSQW58_g2080 | FI23527P1 |
| MBSQW58_g20800 | |
| MBSQW58_g20801 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| MBSQW58_g20802 | |
| MBSQW58_g20803 | STAR-RELATED LIPID TRANSFER PROTEIN 9 |
| MBSQW58_g20804 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g20805 | DOLICHYL GLYCOSYLTRANSFERASE |
| MBSQW58_g20806 | |
| MBSQW58_g20807 | CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN |
| MBSQW58_g20808 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
| MBSQW58_g20809 | |
| MBSQW58_g2081 | |
| MBSQW58_g20810 | |
| MBSQW58_g20811 | 40S RIBOSOMAL PROTEIN S17 |
| MBSQW58_g20812 | COILED-COIL DOMAIN-CONTAINING PROTEIN 60 |
| MBSQW58_g20813 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| MBSQW58_g20814 | LONG-CHAIN FATTY ACID TRANSPORT PROTEIN |
| MBSQW58_g20815 | |
| MBSQW58_g20816 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
| MBSQW58_g20817 | - |
| MBSQW58_g20818 | IMPORTIN-7, 8, 11 |
| MBSQW58_g20819 | F-BOX/WD REPEAT-CONTAINING PROTEIN 5 |
| MBSQW58_g2082 | |
| MBSQW58_g20820 | |
| MBSQW58_g20821 | RIBOSOME BIOGENESIS PROTEIN NSA2 HOMOLOG |
| MBSQW58_g20822 | NEUROTRANSMITTER GATED ION CHANNEL |
| MBSQW58_g20823 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| MBSQW58_g20824 | PROLYL 4-HYDROXYLASE ALPHA SUBUNIT |
| MBSQW58_g20825 | GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER |
| MBSQW58_g20826 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
| MBSQW58_g20827 | MULTIPLE PDZ DOMAIN PROTEIN |
| MBSQW58_g20828 | |
| MBSQW58_g20829 | MULTIPLE PDZ DOMAIN PROTEIN |
| MBSQW58_g2083 | |
| MBSQW58_g20830 | TRANSMEMBRANE PROTEIN 234 |
| MBSQW58_g20831 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| MBSQW58_g20832 | MRNA EXPORT FACTOR AND BUB3 |
| MBSQW58_g20833 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 |
| MBSQW58_g20834 | ARCHAEMETZINCIN |
| MBSQW58_g20835 | ATAXIA TELANGIECTASIA MUTATED ATM -RELATED |
| MBSQW58_g20836 | TUBULIN POLYGLUTAMYLASE COMPLEX SUBUNIT 2 |
| MBSQW58_g20837 | POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING |
| MBSQW58_g20838 | TRANSPOSON |
| MBSQW58_g20839 | CERAMIDE GLUCOSYLTRANSFERASE |
| MBSQW58_g2084 | FASTING-INDUCIBLE INTEGRAL MEMBRANE PROTEIN TM6P1-RELATED |
| MBSQW58_g20840 | U2 SMALL NUCLEAR RIBONUCLEOPROTEIN A |
| MBSQW58_g20841 | HAUS AUGMIN-LIKE COMPLEX SUBUNIT 1 |
| MBSQW58_g20842 |
