The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g20663 | RIBOSE-5-PHOSPHATE ISOMERASE |
| MBSQW58_g20664 | ZINC FINGER PROTEIN 142 |
| MBSQW58_g20665 | ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED |
| MBSQW58_g20666 | TRANSPOSON |
| MBSQW58_g20667 | |
| MBSQW58_g20668 | MYOSIN REGULATORY LIGHT CHAIN 2 |
| MBSQW58_g20669 | UBIQUITIN |
| MBSQW58_g2067 | MAP/MICROTUBULE AFFINITY-REGULATING KINASE |
| MBSQW58_g20670 | REVERSE TRANSCRIPTASES |
| MBSQW58_g20671 | |
| MBSQW58_g20672 | RAB GDP/GTP EXCHANGE FACTOR |
| MBSQW58_g20673 | |
| MBSQW58_g20674 | MCG48959-RELATED |
| MBSQW58_g20675 | BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| MBSQW58_g20676 | PROTEIN SCAI |
| MBSQW58_g20677 | DEOXYHYPUSINE SYNTHASE |
| MBSQW58_g20678 | NETRIN/LAMININ-RELATED |
| MBSQW58_g20679 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| MBSQW58_g2068 | SERINE/THREONINE-PROTEIN KINASE |
| MBSQW58_g20680 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| MBSQW58_g20681 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| MBSQW58_g20682 | |
| MBSQW58_g20683 | |
| MBSQW58_g20684 | |
| MBSQW58_g20685 | TRAF-LIKE SUPERFAMILY PROTEIN |
| MBSQW58_g20686 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g20687 | |
| MBSQW58_g20688 | SOLUTE CARRIER FAMILY 5 |
| MBSQW58_g20689 | |
| MBSQW58_g2069 | SERINE/THREONINE-PROTEIN KINASE |
| MBSQW58_g20690 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| MBSQW58_g20691 | G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g20692 | ZINC FINGER AND SCAN DOMAIN-CONTAINING |
| MBSQW58_g20693 | ZINC FINGER PROTEIN 142 |
| MBSQW58_g20694 | LIPOCALIN-1 INTERACTING MEMBRANE RECEPTOR LIMR |
| MBSQW58_g20695 | |
| MBSQW58_g20696 | |
| MBSQW58_g20697 | |
| MBSQW58_g20698 | |
| MBSQW58_g20699 | |
| MBSQW58_g207 | CDK-ACTIVATING KINASE ASSEMBLY FACTOR MAT1 |
| MBSQW58_g2070 | DIPHTHAMIDE BIOSYNTHESIS PROTEIN |
| MBSQW58_g20700 | TUMOR NECROSIS FACTOR FAMILY MEMBER |
| MBSQW58_g20701 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
| MBSQW58_g20702 | NITRIC OXIDE SYNTHASE-RELATED |
| MBSQW58_g20703 | UNC-93 RELATED |
| MBSQW58_g20704 | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE |
| MBSQW58_g20705 | KELCH PROTEIN |
| MBSQW58_g20706 | |
| MBSQW58_g20707 |
