The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g20573 | DENN DOMAIN-CONTAINING PROTEIN 2 |
| MBSQW58_g20574 | |
| MBSQW58_g20575 | 60S RIBOSOMAL PROTEIN L27A |
| MBSQW58_g20576 | CYSTEINE PROTEASE FAMILY C1-RELATED |
| MBSQW58_g20577 | |
| MBSQW58_g20578 | NATURAL KILLER CELL-SPECIFIC ANTIGEN KLIP1 |
| MBSQW58_g20579 | ZINC FINGER PROTEIN ZIC AND GLI |
| MBSQW58_g2058 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| MBSQW58_g20580 | EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA |
| MBSQW58_g20581 | |
| MBSQW58_g20582 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g20583 | LAR INTERACTING PROTEIN LIP -RELATED PROTEIN |
| MBSQW58_g20584 | |
| MBSQW58_g20585 | |
| MBSQW58_g20586 | UNCHARACTERIZED |
| MBSQW58_g20587 | G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g20588 | ZINC FINGER, RING/FYVE/PHD-TYPE |
| MBSQW58_g20589 | TWISTED GASTRULATION PROTEIN HOMOLOG 1-A-RELATED |
| MBSQW58_g2059 | LOQUACIOUS, ISOFORM B |
| MBSQW58_g20590 | AMINO ACID TRANSPORTER |
| MBSQW58_g20591 | AG-1 BLOOD STAGE MEMBRANE PROTEIN HOMOLOGUE |
| MBSQW58_g20592 | |
| MBSQW58_g20593 | EPM2A-INTERACTING PROTEIN 1 |
| MBSQW58_g20594 | ALANINE AMINOTRANSFERASE |
| MBSQW58_g20595 | AAA DOMAIN-CONTAINING |
| MBSQW58_g20596 | ACYL-COA SYNTHETASE |
| MBSQW58_g20597 | POLY(A) RNA POLYMERASE |
| MBSQW58_g20598 | NF-KAPPA-B INHIBITOR-INTERACTING RAS-LIKE PROTEIN |
| MBSQW58_g20599 | |
| MBSQW58_g206 | |
| MBSQW58_g2060 | CALCIUM BINDING PROTEINS |
| MBSQW58_g20600 | FORKHEAD BOX PROTEIN H1 |
| MBSQW58_g20601 | 60S RIBOSOMAL PROTEIN L13 |
| MBSQW58_g20602 | 5'-NUCLEOTIDASE-RELATED |
| MBSQW58_g20603 | TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED |
| MBSQW58_g20604 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| MBSQW58_g20605 | ARRESTIN DOMAIN CONTAINING PROTEIN |
| MBSQW58_g20606 | |
| MBSQW58_g20607 | |
| MBSQW58_g20608 | ENGULFMENT AND CELL MOTILITY |
| MBSQW58_g20609 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g2061 | |
| MBSQW58_g20610 | SOLUTE CARRIER FAMILY 52 |
| MBSQW58_g20611 | |
| MBSQW58_g20612 | PROTEIN NAKED CUTICLE |
| MBSQW58_g20613 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| MBSQW58_g20614 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| MBSQW58_g20615 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 12 |
| MBSQW58_g20616 | |
| MBSQW58_g20617 |
