The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g20302 | |
| MBSQW58_g20303 | |
| MBSQW58_g20304 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
| MBSQW58_g20305 | DYNEIN LIGHT CHAIN |
| MBSQW58_g20306 | |
| MBSQW58_g20307 | C-TYPE LECTIN SUPERFAMILY MEMBER |
| MBSQW58_g20308 | NUCLEAR RECEPTOR SUBFAMILY 0 GROUP B |
| MBSQW58_g20309 | |
| MBSQW58_g2031 | |
| MBSQW58_g20310 | MALATE DEHYDROGENASE |
| MBSQW58_g20311 | HSD9 |
| MBSQW58_g20312 | BETA-1,4-GALACTOSYLTRANSFERASE |
| MBSQW58_g20313 | BETA-1,4-GALACTOSYLTRANSFERASE |
| MBSQW58_g20314 | |
| MBSQW58_g20315 | |
| MBSQW58_g20316 | THAP DOMAIN PROTEIN |
| MBSQW58_g20317 | GI:13385330 |
| MBSQW58_g20318 | UPF0041 BRAIN PROTEIN 44-RELATED |
| MBSQW58_g20319 | FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g2032 | TRANSMEMBRANE PROTEIN 214 |
| MBSQW58_g20320 | MALATE DEHYDROGENASE |
| MBSQW58_g20321 | |
| MBSQW58_g20322 | ARYL HYDROCARBON RECEPTOR |
| MBSQW58_g20323 | |
| MBSQW58_g20324 | FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE |
| MBSQW58_g20325 | |
| MBSQW58_g20326 | GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN |
| MBSQW58_g20327 | OXIDORED-NITRO DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g20328 | OXIDORED-NITRO DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g20329 | CYTOCHROME P450 FAMILY 7 |
| MBSQW58_g2033 | |
| MBSQW58_g20330 | PROTEIN SON |
| MBSQW58_g20331 | HOMOLOC-13 |
| MBSQW58_g20332 | |
| MBSQW58_g20333 | |
| MBSQW58_g20334 | F-BOX ONLY PROTEIN 3 |
| MBSQW58_g20335 | |
| MBSQW58_g20336 | |
| MBSQW58_g20337 | |
| MBSQW58_g20338 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g20339 | |
| MBSQW58_g2034 | SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER |
| MBSQW58_g20340 | GUSTATORY RECEPTOR |
| MBSQW58_g20341 | 2-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2 |
| MBSQW58_g20342 | LATE ENDOSOMAL/LYSOSOMAL MP1 INTERACTING PROTEIN |
| MBSQW58_g20343 | SGT1 PROTEIN HSGT1 SUPPRESSOR OF GCR2 |
| MBSQW58_g20344 | RNA AND EXPORT FACTOR BINDING PROTEIN |
| MBSQW58_g20345 | THUMP DOMAIN CONTAINING PROTEIN 1-RELATED |
| MBSQW58_g20346 | PROTEIN SIDEKICK |
| MBSQW58_g20347 | PRE-MRNA SPLICING FACTOR PRP31 |
