The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g20122 | MITOCHONDRIAL 2-OXODICARBOXYLATE CARRIER 1-RELATED |
| MBSQW58_g20123 | 50S RIBOSOMAL PROTEIN L21 |
| MBSQW58_g20124 | |
| MBSQW58_g20125 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| MBSQW58_g20126 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| MBSQW58_g20127 | WD REPEAT DOMAIN-CONTAINING FAMILY |
| MBSQW58_g20128 | |
| MBSQW58_g20129 | FROUNT PROTEIN-RELATED |
| MBSQW58_g2013 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 |
| MBSQW58_g20130 | |
| MBSQW58_g20131 | |
| MBSQW58_g20132 | TIAM (MAMMALIAN TUMOR INVASION AND METASTASIS FACTOR) HOMOLOG |
| MBSQW58_g20133 | |
| MBSQW58_g20134 | |
| MBSQW58_g20135 | |
| MBSQW58_g20136 | BTK-BINDING PROTEIN-RELATED |
| MBSQW58_g20137 | ARGININE-TRNA-PROTEIN TRANSFERASE 1 |
| MBSQW58_g20138 | 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT BETA-RELATED |
| MBSQW58_g20139 | VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED |
| MBSQW58_g2014 | |
| MBSQW58_g20140 | |
| MBSQW58_g20141 | PRION-LIKE- Q/N-RICH -DOMAIN-BEARING PROTEIN PROTEIN 44 |
| MBSQW58_g20142 | USP DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g20143 | GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED |
| MBSQW58_g20144 | UNCHARACTERIZED |
| MBSQW58_g20145 | TRANSPOSON |
| MBSQW58_g20146 | WD REPEAT DOMAIN-CONTAINING FAMILY |
| MBSQW58_g20147 | MITOCHONDRIAL DIVISION PROTEIN 1-RELATED |
| MBSQW58_g20148 | |
| MBSQW58_g20149 | E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 |
| MBSQW58_g2015 | BCL-2 RELATED |
| MBSQW58_g20150 | WD REPEAT AND COILED-COIL-CONTAINING PROTEIN |
| MBSQW58_g20151 | PHD-TYPE DOMAIN-CONTAINING PROTEIN |
| MBSQW58_g20152 | PROTEIN MONO-ADP-RIBOSYLTRANSFERASE PARP4 |
| MBSQW58_g20153 | UNCHARACTERIZED |
| MBSQW58_g20154 | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED |
| MBSQW58_g20155 | OVOCHYMASE-RELATED |
| MBSQW58_g20156 | |
| MBSQW58_g20157 | SEC63 DOMAIN-CONTAINING |
| MBSQW58_g20158 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
| MBSQW58_g20159 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1 |
| MBSQW58_g2016 | S-ANTIGEN PROTEIN |
| MBSQW58_g20160 | G-PROTEIN COUPLED RECEPTOR 158-RELATED |
| MBSQW58_g20161 | ALLOGRAFT INFLAMMATORY FACTOR-1 |
| MBSQW58_g20162 | DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED |
| MBSQW58_g20163 | |
| MBSQW58_g20164 | |
| MBSQW58_g20165 | |
| MBSQW58_g20166 | |
| MBSQW58_g20167 |
