The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| - | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
| Title | Journal | Pubmed ID |
|---|---|---|
| De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
| Gene ID | Description |
|---|---|
| MBSQW58_g20078 | ARFAPTIN-RELATED |
| MBSQW58_g20079 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
| MBSQW58_g2008 | |
| MBSQW58_g20080 | |
| MBSQW58_g20081 | NUCLEAR PROTEIN MDM1 |
| MBSQW58_g20082 | |
| MBSQW58_g20083 | PREFOLDIN SUBUNIT 5 |
| MBSQW58_g20084 | |
| MBSQW58_g20085 | PROTEIN CBG26694 |
| MBSQW58_g20086 | INNER MEMBRANE TRANSPORT PROTEIN YAJR |
| MBSQW58_g20087 | PROTEIN DISULFIDE-ISOMERASE TMX3 |
| MBSQW58_g20088 | SH3 DOMAIN-CONTAINING |
| MBSQW58_g20089 | SULFURTRANSFERASE-RELATED |
| MBSQW58_g2009 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| MBSQW58_g20090 | UNCHARACTERIZED PROTEIN C17ORF53 HOMOLOG |
| MBSQW58_g20091 | ENDONUCLEASE V |
| MBSQW58_g20092 | INTERFERON ALPHA-INDUCIBLE PROTEIN 27 |
| MBSQW58_g20093 | |
| MBSQW58_g20094 | INTERFERON ALPHA-INDUCIBLE PROTEIN 27 |
| MBSQW58_g20095 | INTERFERON ALPHA-INDUCIBLE PROTEIN 27 |
| MBSQW58_g20096 | RNA BINDING PROTEIN |
| MBSQW58_g20097 | |
| MBSQW58_g20098 | |
| MBSQW58_g20099 | |
| MBSQW58_g201 | TUBULIN |
| MBSQW58_g2010 | |
| MBSQW58_g20100 | |
| MBSQW58_g20101 | |
| MBSQW58_g20102 | GLYCOPROTEIN HORMONE RECEPTOR |
| MBSQW58_g20103 | |
| MBSQW58_g20104 | SMITH-MAGENIS SYNDROME REGION GENE 8 PROTEIN |
| MBSQW58_g20105 | L-CYSTEINE DESULFHYDRASE |
| MBSQW58_g20106 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| MBSQW58_g20107 | |
| MBSQW58_g20108 | 26S PROTESOME SUBUNIT 6 |
| MBSQW58_g20109 | CYTOCHROME P450 FAMILY 4 |
| MBSQW58_g2011 | |
| MBSQW58_g20110 | AROMATIC AMINO ACID HYDROXYLASE |
| MBSQW58_g20111 | PROTEASOME SUBUNIT ALPHA/BETA |
| MBSQW58_g20112 | |
| MBSQW58_g20113 | |
| MBSQW58_g20114 | |
| MBSQW58_g20115 | ZINC FINGER PROTEIN 593 |
| MBSQW58_g20116 | |
| MBSQW58_g20117 | MICROTUBULE-ASSOCIATED PROTEIN |
| MBSQW58_g20118 | ADAPTOR PROTEIN, PHOSPHOTYROSINE INTERACTION, PH DOMAIN AND LEUCINE ZIPPER-CONTAINING 2 |
| MBSQW58_g20119 | PROTEIN MMS22-LIKE |
| MBSQW58_g2012 | RABCONNECTIN-RELATED |
| MBSQW58_g20120 | N-LINKED OLIGOSACCHARIDE PROCESSING |
| MBSQW58_g20121 |
