The deep-sea limpet Bathyacmaea lactea is a species in the family Acmaeidae. And it is a common species associated with the dominant mussel beds in cold seeps. They can feed on bacteria and decomposing the periostracum of Bathymodiolus shells, which make deep-sea limpets different from the well-studied symbionts.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Bathyacmaea lactea | Mollusca | deep-sea limpet Bathyacmaea lactea | Cold seep | 1,388 | Haima cold seeps in the South China Sea | 2049241 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 754.3Mb | Contig | 2020 | - | Hong Kong University of Science and Technology | PRJNA588374 | 94.30% | 23,574 |
Title | Journal | Pubmed ID |
---|---|---|
De Novo Genome Assembly of Limpet Bathyacmaea lactea (Gastropoda: Pectinodontidae): The First Reference Genome of a Deep-Sea Gastropod Endemic to Cold Seeps | Genome Biol Evol | 32467969 |
Gene ID | Description |
---|---|
MBSQW58_g1999 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
MBSQW58_g19990 | ZINC FINGER PROTEIN |
MBSQW58_g19991 | |
MBSQW58_g19992 | |
MBSQW58_g19993 | SULFATE TRANSPORTER |
MBSQW58_g19994 | |
MBSQW58_g19995 | 40S RIBOSOMAL PROTEIN S3A |
MBSQW58_g19996 | PROTEIN LIN-7 HOMOLOG |
MBSQW58_g19997 | |
MBSQW58_g19998 | ZINC FINGER PROTEIN |
MBSQW58_g19999 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
MBSQW58_g2 | RNA HELICASE |
MBSQW58_g20 | PROTEIN CBG26694 |
MBSQW58_g200 | TUBULIN |
MBSQW58_g2000 | TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT |
MBSQW58_g20000 | TNF RECEPTOR ASSOCIATED FACTOR |
MBSQW58_g20001 | HEAT SHOCK 70 KDA PROTEIN 14 |
MBSQW58_g20002 | SOLUTE CARRIER FAMILY 17 |
MBSQW58_g20003 | |
MBSQW58_g20004 | - |
MBSQW58_g20005 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
MBSQW58_g20006 | |
MBSQW58_g20007 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
MBSQW58_g20008 | ZINC FINGER PROTEIN ZIC AND GLI |
MBSQW58_g20009 | FINGER PUTATIVE TRANSCRIPTION FACTOR FAMILY-RELATED |
MBSQW58_g2001 | UBIQUITIN-ACTIVATING ENZYME E1 |
MBSQW58_g20010 | |
MBSQW58_g20011 | AMINO ACID TRANSPORTER |
MBSQW58_g20012 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
MBSQW58_g20013 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
MBSQW58_g20014 | DDB1- AND CUL4-ASSOCIATED FACTOR 12-RELATED |
MBSQW58_g20015 | |
MBSQW58_g20016 | U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT |
MBSQW58_g20017 | GLYCOSYLTRANSFERASE |
MBSQW58_g20018 | PERSULFIDE DIOXYGENASE ETHE1 |
MBSQW58_g20019 | ANAPHASE-PROMOTING COMPLEX SUBUNIT 13 |
MBSQW58_g2002 | |
MBSQW58_g20020 | C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED |
MBSQW58_g20021 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
MBSQW58_g20022 | ASPARTYL PROTEASE-RELATED |
MBSQW58_g20023 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
MBSQW58_g20024 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
MBSQW58_g20025 | PDZ DOMAIN CONTAINING RING FINGER PROTEIN 3, 4 |
MBSQW58_g20026 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
MBSQW58_g20027 | |
MBSQW58_g20028 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
MBSQW58_g20029 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
MBSQW58_g2003 | UBIQUITIN-ACTIVATING ENZYME E1 |
MBSQW58_g20030 | DYNEIN HEAVY CHAIN FAMILY PROTEIN |
MBSQW58_g20031 | DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN |