About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf4467_4.2
PE_Scaf4468_1.2
PE_Scaf4468_10.2TRANSMEMBRANE 9 SUPERFAMILY PROTEIN
PE_Scaf4468_11.3MONOCARBOXYLATE TRANSPORTER
PE_Scaf4468_13.0
PE_Scaf4468_13.1
PE_Scaf4468_13.2
PE_Scaf4468_14.0
PE_Scaf4468_14.11RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
PE_Scaf4468_2.3MYOSIN
PE_Scaf4468_3.2BLOM7
PE_Scaf4468_5.5PROTEIN ARGININE N-METHYLTRANSFERASE 5
PE_Scaf4468_5.7LYSINE-SPECIFIC DEMETHYLASE
PE_Scaf4468_6.4
PE_Scaf4468_6.6SCAVENGER RECEPTOR CLASS F
PE_Scaf4468_6.7KRUEPPEL-LIKE TRANSCRIPTION FACTOR
PE_Scaf4468_8.6LONG-CHAIN-FATTY-ACID--COA LIGASE
PE_Scaf4468_8.9
PE_Scaf4468_9.4PROTEIN TAG-278-RELATED
PE_Scaf4469_0.0
PE_Scaf4472_0.0
PE_Scaf4474_10.13ABC1 FAMILY PROTEIN
PE_Scaf4474_10.15P25 ALPHA-RELATED
PE_Scaf4474_10.7P25 ALPHA-RELATED
PE_Scaf4474_11.6PLEXUS, ISOFORM A
PE_Scaf4474_13.11
PE_Scaf4474_13.13GENETIC SUPPRESSOR ELEMENT 1
PE_Scaf4474_13.14
PE_Scaf4474_13.16TRANSMEMBRANE PROTEIN 143 FAMILY MEMBER
PE_Scaf4474_14.5FORKHEAD BOX PROTEIN
PE_Scaf4474_15.2FORKHEAD BOX PROTEIN
PE_Scaf4474_16.2GDP-MANNOSE 4,6-DEHYDRATASE
PE_Scaf4474_3.6GUANYLYL CYCLASE
PE_Scaf4474_3.9
PE_Scaf4474_4.4
PE_Scaf4474_4.6SMALL INTEGRAL MEMBRANE PROTEIN 15
PE_Scaf4474_4.9
PE_Scaf4474_5.2
PE_Scaf4474_5.4
PE_Scaf4474_7.4FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I
PE_Scaf4474_7.6TRNA-SPECIFIC ADENOSINE DEAMINASE 1
PE_Scaf4477_0.1
PE_Scaf4477_0.4
PE_Scaf4477_0.5
PE_Scaf4477_0.6
PE_Scaf4477_0.9
PE_Scaf4478_1.7SERINE/THREONINE-PROTEIN KINASE
PE_Scaf4478_1.9
PE_Scaf4479_0.3GROWTH FACTOR RECEPTOR-BOUND PROTEIN
PE_Scaf4479_0.5ZGC:153352
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