About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf4350_0.1
PE_Scaf4350_0.4
PE_Scaf4351_0.0
PE_Scaf4353_0.5ACETYLCHOLINESTERASE
PE_Scaf4355_0.1
PE_Scaf4355_1.0
PE_Scaf4355_1.6
PE_Scaf4355_1.7UBIQUITIN DOMAIN-CONTAINING PROTEIN UBFD1
PE_Scaf4356_0.3GH01354P
PE_Scaf4356_1.18SOLUTE CARRIER FAMILY 25 MEMBER 44
PE_Scaf4356_1.23TRANSLATIONAL ACTIVATOR GCN1-RELATED
PE_Scaf4356_1.9ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER
PE_Scaf4358_0.0
PE_Scaf4358_0.1
PE_Scaf4359_0.3EPPIN
PE_Scaf4360_0.3BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
PE_Scaf4360_0.4D-ERYTHRULOSE REDUCTASE
PE_Scaf4360_10.2NF-E2 INDUCIBLE PROTEIN
PE_Scaf4360_10.8
PE_Scaf4360_12.3RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS
PE_Scaf4360_13.55'-NUCLEOTIDASE
PE_Scaf4360_13.6COILED-COIL DOMAIN-CONTAINING PROTEIN 14
PE_Scaf4360_14.19BLR2807 PROTEIN
PE_Scaf4360_14.5BLR2807 PROTEIN
PE_Scaf4360_15.1BLR2807 PROTEIN
PE_Scaf4360_16.4LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
PE_Scaf4360_17.1UPF0705 PROTEIN C11ORF49
PE_Scaf4360_18.13TEKTIN
PE_Scaf4360_18.7
PE_Scaf4360_18.8
PE_Scaf4360_18.9
PE_Scaf4360_2.2D-ERYTHRULOSE REDUCTASE
PE_Scaf4360_5.5VILLIN
PE_Scaf4360_8.0
PE_Scaf4360_8.2CONTACTIN 5
PE_Scaf4363_0.0
PE_Scaf4363_0.1
PE_Scaf4363_0.2
PE_Scaf4363_0.4
PE_Scaf4363_0.6
PE_Scaf4366_1.5CLASP
PE_Scaf4367_1.4
PE_Scaf436_0.0
PE_Scaf436_0.5FIBRILLIN-RELATED
PE_Scaf436_0.6MUCIN 4-RELATED
PE_Scaf4370_0.0
PE_Scaf4370_0.1
PE_Scaf4370_0.2
PE_Scaf4370_0.6
PE_Scaf4373_0.0
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