About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf4401_0.0
PE_Scaf4401_0.3PALMITOYLTRANSFERASE
PE_Scaf4405_0.0
PE_Scaf4406_0.0
PE_Scaf4406_0.1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
PE_Scaf4406_0.4
PE_Scaf4406_2.0
PE_Scaf4406_3.14SNRNP CORE PROTEIN FAMILY MEMBER
PE_Scaf4406_3.5METALLOPROTEASE TLDD
PE_Scaf4406_3.6COLLAGEN ALPHA
PE_Scaf4406_3.7F-BOX/WD REPEAT-CONTAINING PROTEIN 5
PE_Scaf4408_0.4COFILIN-RELATED
PE_Scaf4408_0.5
PE_Scaf4412_0.1EPPIN
PE_Scaf4412_2.3TYROSINE-PROTEIN KINASE RECEPTOR
PE_Scaf4413_0.44.1 G PROTEIN
PE_Scaf4413_1.10RIBOSOMAL PROTEIN S19P FAMILY MEMBER
PE_Scaf4413_1.11AGAP008005-PA
PE_Scaf4413_1.2
PE_Scaf4413_2.0
PE_Scaf4413_2.13
PE_Scaf4413_2.14PEPTIDE N-GLYCANASE PNGASE -RELATED
PE_Scaf4413_2.5COILED-COIL DOMAIN-CONTAINING PROTEIN 171
PE_Scaf4414_0.2
PE_Scaf4414_0.3
PE_Scaf4419_0.3
PE_Scaf4419_0.4
PE_Scaf4419_0.5
PE_Scaf4419_0.8
PE_Scaf441_0.0
PE_Scaf4420_0.0
PE_Scaf4421_1.2
PE_Scaf4421_1.5
PE_Scaf4421_1.8
PE_Scaf4423_0.4FIBRINOGEN/TENASCIN/ANGIOPOEITIN
PE_Scaf4423_1.15FIBRINOGEN/TENASCIN/ANGIOPOEITIN
PE_Scaf4423_1.16FIBRINOGEN/TENASCIN/ANGIOPOEITIN
PE_Scaf4426_1.0UNCHARACTERIZED
PE_Scaf4426_1.5PROPIONYL-COA CARBOXYLASE BETA CHAIN
PE_Scaf4428_3.11
PE_Scaf4428_3.12SERINE/ARGININE REPETITIVE MATRIX PROTEIN 3-RELATED
PE_Scaf4428_3.13TRICHOPLEIN KERATIN FILAMENT-BINDING PROTEIN FAMILY MEMBER
PE_Scaf4428_3.8TRNA (URACIL-5-)-METHYLTRANSFERASE
PE_Scaf4430_0.0
PE_Scaf4430_0.2
PE_Scaf4430_2.10RIBOSOMAL S SUBUNIT
PE_Scaf4430_3.6ORGANIC ANION TRANSPORTER
PE_Scaf4430_4.6LATROPHILIN RECEPTOR-LIKE PROTEIN A
PE_Scaf4430_4.7IRE1-RELATED
PE_Scaf4434_0.0
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