About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

<< First 227 228 229 230 231 232 233 234 235 236 Forward> Last>>        450 pages in total

Gene IDDescription
HS11601GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE
HS11602STAC
HS11603MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 1
HS11604MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 1
HS11605BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
HS11606PROTEIN PHOSPHATASE INHIBITOR AND DOPAMINE- AND CAMP-REGULATED NEURONAL PHOSPHOPROTEIN
HS11607NNMT/PNMT/TEMT FAMILY MEMBER
HS11608
HS11609GLUTAMATE SEMIALDEHYDE DEHYDROGENASE
HS11610BETA/GAMMA CRYSTALLIN
HS11611BETA/GAMMA CRYSTALLIN
HS11612TRANSCRIPTION FACTOR 7 FAMILY MEMBER
HS11613VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED
HS11614PALMITOYLTRANSFERASE ZDHHC16
HS11615DEPHOSPHO-COA KINASE-RELATED
HS11616IMMUNOGLOBULIN
HS11617PSEUDOURIDYLATE SYNTHASE
HS11618DEPHOSPHO-COA KINASE-RELATED
HS11619CEREBELLIN-RELATED
HS11620VINCULIN
HS11621ADENOSINE KINASE
HS11622HISTONE ACETYLTRANSFERASE
HS11623AGAP008228-PA
HS11624AGAP008228-PA
HS11625AGAP008228-PA
HS11626
HS11627AGAP008228-PA
HS11628SPHINGOMYELIN SYNTHETASE
HS11629VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL
HS11630O-METHYLTRANSFERASE-RELATED
HS11631ZINC-FINGER PROTEIN NOLZ1-RELATED
HS11632CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN
HS11633DISKS LARGE HOMOLOG 5
HS11634ANNEXIN
HS11635
HS11636PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
HS11637ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
HS11638DNA-DIRECTED RNA POLYMERASE
HS11639NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS11640THYMUS, BRAIN AND TESTES-ASSOCIATED
HS11641STEROIDOGENIC ACUTE REGULATORY PROTEIN, MITOCHONDRIAL
HS11642ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
HS11643TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
HS11644TGF-BETA FAMILY
HS11645-
HS11646INORGANIC PYROPHOSPHATASE
HS11647RE74312P
HS11648SPARC OSTEONECTIN
HS11649ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 1
HS11650ANAPHASE-PROMOTING COMPLEX SUBUNIT 16
TOP