About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold3188.13254SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11
mRNA.BJAM.scaffold3189.13255
mRNA.BJAM.scaffold3189.13256CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
mRNA.BJAM.scaffold3189.13257
mRNA.BJAM.scaffold3189.13258CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB
mRNA.BJAM.scaffold3189.13259-
mRNA.BJAM.scaffold3189.13260
mRNA.BJAM.scaffold319.2420TUMOR PROTEIN P53-INDUCIBLE PROTEIN 13
mRNA.BJAM.scaffold319.2421SERINE PROTEASE INHIBITOR, SERPIN
mRNA.BJAM.scaffold319.2422
mRNA.BJAM.scaffold319.2423
mRNA.BJAM.scaffold319.2424SYNAPTOTAGMIN 14, ISOFORM D
mRNA.BJAM.scaffold319.2425RP42 RELATED
mRNA.BJAM.scaffold319.2426UNCHARACTERIZED
mRNA.BJAM.scaffold319.2427ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE
mRNA.BJAM.scaffold319.2428ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE
mRNA.BJAM.scaffold319.2429SOLUTE CARRIER FAMILY 22 MEMBER
mRNA.BJAM.scaffold319.2430SOLUTE CARRIER FAMILY 22 MEMBER
mRNA.BJAM.scaffold319.2431
mRNA.BJAM.scaffold319.2432CORNICHON-RELATED
mRNA.BJAM.scaffold319.2433
mRNA.BJAM.scaffold3190.13261
mRNA.BJAM.scaffold3192.13262
mRNA.BJAM.scaffold3192.13263FI18025P1
mRNA.BJAM.scaffold3193.13264TYROSINE-PROTEIN KINASE RECEPTOR
mRNA.BJAM.scaffold3193.13265TYROSINE-PROTEIN KINASE
mRNA.BJAM.scaffold3193.13266
mRNA.BJAM.scaffold3193.13267
mRNA.BJAM.scaffold3194.13268
mRNA.BJAM.scaffold3194.13269
mRNA.BJAM.scaffold3194.13270PROTEIN HGH1 HOMOLOG
mRNA.BJAM.scaffold3194.13271
mRNA.BJAM.scaffold3195.13272N-ALPHA-ACETYLTRANSFERASE
mRNA.BJAM.scaffold3198.13273ACYL-COA DEHYDROGENASE
mRNA.BJAM.scaffold3198.13274
mRNA.BJAM.scaffold32.247
mRNA.BJAM.scaffold32.248
mRNA.BJAM.scaffold32.249
mRNA.BJAM.scaffold320.2434
mRNA.BJAM.scaffold3201.13275
mRNA.BJAM.scaffold3201.13276HEPARAN SULFATE SULFOTRANSFERASE
mRNA.BJAM.scaffold3202.13277ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100
mRNA.BJAM.scaffold3202.13278CENTROMERE PROTEIN E
mRNA.BJAM.scaffold3202.13279CELL DIVISION CYCLE 16,23,27
mRNA.BJAM.scaffold3203.13280UNCHARACTERIZED
mRNA.BJAM.scaffold3203.13281ZYX102 PROTEIN
mRNA.BJAM.scaffold3205.13282COATOMER
mRNA.BJAM.scaffold3205.13283
mRNA.BJAM.scaffold3206.13284
mRNA.BJAM.scaffold3206.13285ZINC FINGER PROTEIN
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