About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold3110.13111PROTON CHANNEL OTOP
mRNA.BJAM.scaffold3113.13112BEIGE/BEACH-RELATED
mRNA.BJAM.scaffold3113.13113CELL FATE DETERMINING PROTEIN MAB21-RELATED
mRNA.BJAM.scaffold3113.13114CELL FATE DETERMINING PROTEIN MAB21-RELATED
mRNA.BJAM.scaffold3113.13115BEIGE/BEACH-RELATED
mRNA.BJAM.scaffold3113.13116
mRNA.BJAM.scaffold3113.13117
mRNA.BJAM.scaffold3115.13118
mRNA.BJAM.scaffold3116.13119UNCHARACTERIZED
mRNA.BJAM.scaffold3116.13120E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED
mRNA.BJAM.scaffold3116.13121PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
mRNA.BJAM.scaffold3116.13122PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE
mRNA.BJAM.scaffold3117.13123
mRNA.BJAM.scaffold3119.13124PLEXIN
mRNA.BJAM.scaffold312.2310
mRNA.BJAM.scaffold312.2311
mRNA.BJAM.scaffold312.2312
mRNA.BJAM.scaffold312.2313UPF0462 PROTEIN
mRNA.BJAM.scaffold312.2314
mRNA.BJAM.scaffold312.2315
mRNA.BJAM.scaffold312.2316
mRNA.BJAM.scaffold312.2317
mRNA.BJAM.scaffold312.2318G/T AND G/U MISMATCH-SPECIFIC DNA GLYCOSYLASE
mRNA.BJAM.scaffold312.2319UNCHARACTERIZED
mRNA.BJAM.scaffold312.2320
mRNA.BJAM.scaffold312.2321BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
mRNA.BJAM.scaffold312.2322LUNG ADENOMA SUSCEPTIBILITY 1-RELATED
mRNA.BJAM.scaffold312.2323C1ORF73 PROTEIN
mRNA.BJAM.scaffold312.2324C1ORF73 PROTEIN
mRNA.BJAM.scaffold312.2325HMG BOX-CONTAINING PROTEIN 1
mRNA.BJAM.scaffold312.2326
mRNA.BJAM.scaffold312.2327
mRNA.BJAM.scaffold312.2328ARRESTIN DOMAIN-CONTAINING PROTEIN D
mRNA.BJAM.scaffold312.2329
mRNA.BJAM.scaffold312.2330NUCLEOSIDE DIPHOSPHATE KINASE 6
mRNA.BJAM.scaffold312.2331PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4
mRNA.BJAM.scaffold312.2332ATP-BINDING TRANSPORT PROTEIN-RELATED
mRNA.BJAM.scaffold312.2333
mRNA.BJAM.scaffold312.2334ZINC FINGER PROTEIN
mRNA.BJAM.scaffold3120.13125METABOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold3120.13126
mRNA.BJAM.scaffold3120.13127METABOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold3120.13128
mRNA.BJAM.scaffold3120.13129METABOTROPIC GLUTAMATE RECEPTOR
mRNA.BJAM.scaffold3121.13130RING FINGER PROTEIN 141-RELATED
mRNA.BJAM.scaffold3123.13131
mRNA.BJAM.scaffold3123.13132
mRNA.BJAM.scaffold3123.13133
mRNA.BJAM.scaffold3124.13134
mRNA.BJAM.scaffold3125.13135
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