About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold3156.13198PHOSPHOLIPASE D
mRNA.BJAM.scaffold3156.13199ATP-BINDING CASSETTE SUB-FAMILY C
mRNA.BJAM.scaffold3156.13200INTRAFLAGELLAR TRANSPORT PROTEIN 74 HOMOLOG
mRNA.BJAM.scaffold3156.13201INTRAFLAGELLAR TRANSPORT PROTEIN 74 HOMOLOG
mRNA.BJAM.scaffold3156.13202
mRNA.BJAM.scaffold3158.13203
mRNA.BJAM.scaffold316.2374PROTEIN STAR
mRNA.BJAM.scaffold316.2375LD22376P
mRNA.BJAM.scaffold316.2376DNAJ HOMOLOG SUBFAMILY C MEMBER 1
mRNA.BJAM.scaffold316.2377ENDOPLASMIC RETICULUM PROTEIN ERP29
mRNA.BJAM.scaffold316.2378
mRNA.BJAM.scaffold3160.13204
mRNA.BJAM.scaffold3161.13205
mRNA.BJAM.scaffold3161.1320660S RIBOSOMAL PROTEIN L36A/L44
mRNA.BJAM.scaffold3163.13207SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
mRNA.BJAM.scaffold3163.13208SODIUM/DICARBOXYLATE SYMPORTER-RELATED
mRNA.BJAM.scaffold3163.13209UNCHARACTERIZED
mRNA.BJAM.scaffold3163.13210SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
mRNA.BJAM.scaffold3163.13212
mRNA.BJAM.scaffold3167.13213
mRNA.BJAM.scaffold3167.13215NACHT DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold3167.13216SLR5058 PROTEIN
mRNA.BJAM.scaffold3168.13217CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold317.2379
mRNA.BJAM.scaffold317.2380
mRNA.BJAM.scaffold317.2381RE48511P
mRNA.BJAM.scaffold317.2382FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold317.2383
mRNA.BJAM.scaffold317.2384
mRNA.BJAM.scaffold317.2385
mRNA.BJAM.scaffold317.2386
mRNA.BJAM.scaffold317.2387UNCHARACTERIZED
mRNA.BJAM.scaffold317.2388
mRNA.BJAM.scaffold317.2389
mRNA.BJAM.scaffold317.2390
mRNA.BJAM.scaffold317.2391
mRNA.BJAM.scaffold317.2392FI07246P-RELATED-RELATED
mRNA.BJAM.scaffold3170.13218SULFATE TRANSPORTER
mRNA.BJAM.scaffold3170.13219G-PROTEIN COUPLED RECEPTOR 158-RELATED
mRNA.BJAM.scaffold3170.13220
mRNA.BJAM.scaffold3170.13221E3 UBIQUITIN-PROTEIN LIGASE MYCBP2
mRNA.BJAM.scaffold3170.13222E3 UBIQUITIN-PROTEIN LIGASE MYCBP2
mRNA.BJAM.scaffold3170.13223
mRNA.BJAM.scaffold3171.13224INO80 COMPLEX SUBUNIT B
mRNA.BJAM.scaffold3171.13225INO80 COMPLEX SUBUNIT B
mRNA.BJAM.scaffold3175.13226NUCLEOLAR RNA-ASSOCIATED PROTEIN
mRNA.BJAM.scaffold3176.13227DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 12
mRNA.BJAM.scaffold3176.13228PROTEIN LIN1
mRNA.BJAM.scaffold3176.13229VACUOLAR PROTEIN SORTING 54
mRNA.BJAM.scaffold3176.13230ENGULFMENT AND CELL MOTILITY
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