About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold308.22773-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE
mRNA.BJAM.scaffold308.2278SPHINGOMYELIN PHOSPHODIESTERASE
mRNA.BJAM.scaffold308.2279BESTROPHIN
mRNA.BJAM.scaffold308.2280BESTROPHIN
mRNA.BJAM.scaffold308.2281
mRNA.BJAM.scaffold3081.13054
mRNA.BJAM.scaffold3082.13055
mRNA.BJAM.scaffold3082.13056
mRNA.BJAM.scaffold3082.13057BETA-HEXOSAMINIDASE
mRNA.BJAM.scaffold3082.13058UNCHARACTERIZED
mRNA.BJAM.scaffold3082.13059
mRNA.BJAM.scaffold3082.13060
mRNA.BJAM.scaffold3082.13061FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
mRNA.BJAM.scaffold3082.13062FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
mRNA.BJAM.scaffold3082.13063WD40 REPEAT PROTEIN
mRNA.BJAM.scaffold3082.13064E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
mRNA.BJAM.scaffold3083.13065STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold3083.13066STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold3085.13067
mRNA.BJAM.scaffold3085.13068RAB FAMILY
mRNA.BJAM.scaffold3085.13069LEUCOKININ RECEPTOR-RELATED
mRNA.BJAM.scaffold3086.13070ACIDIC FIBROBLAST GROWTH FACTOR INTRACELLULAR BINDING PROTEIN
mRNA.BJAM.scaffold3086.13071
mRNA.BJAM.scaffold3088.13072
mRNA.BJAM.scaffold3088.13073HOMEO BOX HB9 LIKE A-RELATED
mRNA.BJAM.scaffold3089.13074NEUROTRANSMITTER GATED ION CHANNEL
mRNA.BJAM.scaffold309.2282
mRNA.BJAM.scaffold309.2283FIBRINOGEN/TENASCIN/ANGIOPOEITIN
mRNA.BJAM.scaffold309.2284FATTY ACID AMIDE HYDROLASE
mRNA.BJAM.scaffold309.2285FATTY ACID AMIDE HYDROLASE
mRNA.BJAM.scaffold309.2286
mRNA.BJAM.scaffold309.2287TGF-BETA FAMILY
mRNA.BJAM.scaffold309.2288SIT4 YEAST -ASSOCIATING PROTEIN-RELATED
mRNA.BJAM.scaffold309.2289
mRNA.BJAM.scaffold309.2290
mRNA.BJAM.scaffold3091.13076
mRNA.BJAM.scaffold3091.13077TETRATRICOPEPTIDE REPEAT PROTEIN 6
mRNA.BJAM.scaffold3091.13078DNAJ HOMOLOG SUBFAMILY C MEMBER 7
mRNA.BJAM.scaffold3091.13079DNAJ HOMOLOG SUBFAMILY C MEMBER 7
mRNA.BJAM.scaffold3091.13081LD24721P
mRNA.BJAM.scaffold3091.13082DNAJ HOMOLOG SUBFAMILY C MEMBER 7
mRNA.BJAM.scaffold3093.13083-
mRNA.BJAM.scaffold3093.13084
mRNA.BJAM.scaffold3093.13085N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL BIOSYNTHETIC PROTEIN
mRNA.BJAM.scaffold3094.13086POU DOMAIN
mRNA.BJAM.scaffold3094.13087
mRNA.BJAM.scaffold3095.13088
mRNA.BJAM.scaffold3095.13089
mRNA.BJAM.scaffold3095.13090
mRNA.BJAM.scaffold3095.13091UNCHARACTERIZED
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