About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold322.2452CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 57
mRNA.BJAM.scaffold322.2453CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 57
mRNA.BJAM.scaffold322.2455MOLYBDOPTERIN BIOSYNTHESIS PROTEIN
mRNA.BJAM.scaffold3221.1331939S RIBOSOMAL PROTEIN L10, MITOCHONDRIAL
mRNA.BJAM.scaffold3221.1332030S/40S RIBOSOMAL PROTEIN S3
mRNA.BJAM.scaffold3223.13321
mRNA.BJAM.scaffold3224.13322
mRNA.BJAM.scaffold3225.13323RAP GTPASE-ACTIVATING PROTEIN
mRNA.BJAM.scaffold3225.13324
mRNA.BJAM.scaffold3225.13325
mRNA.BJAM.scaffold3225.13326SET AND MYND DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold3225.13327SET AND MYND DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold3225.13328UNCHARACTERIZED
mRNA.BJAM.scaffold3225.13329UNCHARACTERIZED
mRNA.BJAM.scaffold3225.13330METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE C PROTEIN
mRNA.BJAM.scaffold3225.13331TRNA-SPECIFIC ADENOSINE DEAMINASE 1
mRNA.BJAM.scaffold3225.13332PROCOLLAGEN-LYSINE,2-OXOGLUTARATE 5-DIOXYGENASE/GLYCOSYLTRANSFERASE 25 FAMILY MEMBER
mRNA.BJAM.scaffold3225.13333BASIGIN RELATED
mRNA.BJAM.scaffold3226.13334LIPOXYGENASE
mRNA.BJAM.scaffold3227.13335
mRNA.BJAM.scaffold3227.13336
mRNA.BJAM.scaffold3227.13337
mRNA.BJAM.scaffold3227.13338GLR0591 PROTEIN
mRNA.BJAM.scaffold3227.13339
mRNA.BJAM.scaffold3227.13340GLR0591 PROTEIN
mRNA.BJAM.scaffold3227.13341
mRNA.BJAM.scaffold3227.13342
mRNA.BJAM.scaffold3227.13343GLR0591 PROTEIN
mRNA.BJAM.scaffold3229.13346
mRNA.BJAM.scaffold323.2456
mRNA.BJAM.scaffold323.2457DETERIN
mRNA.BJAM.scaffold323.2458
mRNA.BJAM.scaffold323.2459MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 8
mRNA.BJAM.scaffold323.2460
mRNA.BJAM.scaffold323.2461
mRNA.BJAM.scaffold323.2462
mRNA.BJAM.scaffold323.2463HISTONE DEACETYLASE HDAC1-RELATED
mRNA.BJAM.scaffold323.2464
mRNA.BJAM.scaffold323.2465UNCHARACTERIZED
mRNA.BJAM.scaffold3231.13347
mRNA.BJAM.scaffold3231.13348GLUCOSYLCERAMIDASE
mRNA.BJAM.scaffold3232.13349
mRNA.BJAM.scaffold3232.13350DNA REPAIR ENDONUCLEASE XPF
mRNA.BJAM.scaffold3232.13351RAD50-INTERACTING PROTEIN 1 RINT-1
mRNA.BJAM.scaffold3232.13352PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold3232.13353PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold3232.13354PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold3232.13355CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7
mRNA.BJAM.scaffold3232.13356PROTEASE M1 ZINC METALLOPROTEASE
mRNA.BJAM.scaffold3232.13357PROTEASE M1 ZINC METALLOPROTEASE
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