About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g19674TRICHOHYALIN-RELATED
Chiridota_g19675
Chiridota_g19676
Chiridota_g19677
Chiridota_g19678OXIDOREDUCTASE GLYR1-RELATED
Chiridota_g19679
Chiridota_g1968
Chiridota_g19680MALATE SYNTHASE
Chiridota_g19681
Chiridota_g19682RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Chiridota_g19683
Chiridota_g19684WD40 REPEAT PROTEINPRL1/PRL2-RELATED
Chiridota_g19685CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Chiridota_g19686
Chiridota_g19687REVERSE TRANSCRIPTASE
Chiridota_g19688SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Chiridota_g19689
Chiridota_g1969
Chiridota_g19690-
Chiridota_g19691-
Chiridota_g19692
Chiridota_g19693
Chiridota_g19694
Chiridota_g19695RABCONNECTIN-RELATED
Chiridota_g19696
Chiridota_g19697PHD-TYPE DOMAIN-CONTAINING PROTEIN
Chiridota_g19698
Chiridota_g19699
Chiridota_g197
Chiridota_g1970CLASPIN
Chiridota_g19700
Chiridota_g19701INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g19702
Chiridota_g19703
Chiridota_g19704
Chiridota_g19705GLYCINE N-METHYLTRANSFERASE
Chiridota_g19706
Chiridota_g19707
Chiridota_g19708UNCHARACTERIZED
Chiridota_g19709NUCLEOLAR COMPLEX PROTEIN 4
Chiridota_g1971AMINO ACID TRANSPORTER
Chiridota_g19710ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g19711
Chiridota_g19712
Chiridota_g19713DENTIN SIALOPHOSPHOPROTEIN
Chiridota_g19714
Chiridota_g19715ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g19716
Chiridota_g19717
Chiridota_g19718
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