About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g19629-
Chiridota_g1963
Chiridota_g19630-
Chiridota_g19631
Chiridota_g19632-
Chiridota_g19633ENZYMATIC POLYPROTEIN-RELATED
Chiridota_g19634
Chiridota_g19635
Chiridota_g19636EF HAND DOMAIN FAMILY A1,A2-RELATED
Chiridota_g19637WD40 REPEAT DOMAIN 95
Chiridota_g19638
Chiridota_g19639E3 UBIQUITIN-PROTEIN LIGASE ATL42
Chiridota_g1964
Chiridota_g19640
Chiridota_g19641HYALURONAN MEDIATED MOTILITY RECEPTOR
Chiridota_g19642METHYLMALONYL-COA MUTASE
Chiridota_g19643RING FINGER PROTEIN 141-RELATED
Chiridota_g19644
Chiridota_g19645
Chiridota_g19646
Chiridota_g19647
Chiridota_g19648
Chiridota_g19649
Chiridota_g1965INOSITOL-TETRAKISPHOSPHATE 1-KINASE
Chiridota_g19650SOLUTE CARRIER FAMILY 22 MEMBER
Chiridota_g19651
Chiridota_g19652
Chiridota_g19653
Chiridota_g19654RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER
Chiridota_g19655RIBONUCLEASE H1
Chiridota_g19656
Chiridota_g19657P PROTEIN
Chiridota_g19658GALACTOSE-3-O-SULFOTRANSFERASE
Chiridota_g19659COILED-COIL DOMAIN-CONTAINING PROTEIN 73
Chiridota_g1966
Chiridota_g19660
Chiridota_g19661
Chiridota_g19662NOTCH LIGAND FAMILY MEMBER
Chiridota_g19663
Chiridota_g19664
Chiridota_g19665
Chiridota_g19666REVERSE TRANSCRIPTASE
Chiridota_g19667
Chiridota_g19668COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Chiridota_g19669NOTCH LIGAND FAMILY MEMBER
Chiridota_g1967INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g19670FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Chiridota_g19671
Chiridota_g19672
Chiridota_g19673GLUTAMINE SYNTHETASE
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