About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g19449
Chiridota_g1945
Chiridota_g19450
Chiridota_g19451EG:EG0003.4 PROTEIN-RELATED
Chiridota_g19452EG:EG0003.4 PROTEIN-RELATED
Chiridota_g19453
Chiridota_g19454
Chiridota_g19455
Chiridota_g19456SOLUTE CARRIER FAMILY 25
Chiridota_g19457UBIQUITIN-CONJUGATING ENZYME E2
Chiridota_g19458TNFR-CYS DOMAIN-CONTAINING PROTEIN
Chiridota_g19459
Chiridota_g1946
Chiridota_g19460RAD54-LIKE
Chiridota_g19461MUCIN 4-RELATED
Chiridota_g19462UNCHARACTERIZED
Chiridota_g19463VERY-LONG-CHAIN 3-OXOOACYL-COA REDUCTASE
Chiridota_g19464
Chiridota_g19465F-BOX ONLY PROTEIN 33
Chiridota_g19466RHO GTPASE ACTIVATING PROTEIN AT 15B, ISOFORM C
Chiridota_g19467
Chiridota_g19468
Chiridota_g19469
Chiridota_g1947
Chiridota_g19470LIPOYL SYNTHASE
Chiridota_g19471RCG42593, ISOFORM CRA_A
Chiridota_g19472SODIUM CHANNEL AND CLATHRIN LINKER 1
Chiridota_g19473
Chiridota_g19474E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED
Chiridota_g19475UNCHARACTERIZED
Chiridota_g19476CBP/P300-RELATED
Chiridota_g19477
Chiridota_g19478AARF DOMAIN CONTAINING KINASE 2 (PREDICTED)
Chiridota_g19479RAB FAMILY
Chiridota_g1948EXPRESSED PROTEIN
Chiridota_g19480RAI16 PROTEIN-RELATED
Chiridota_g19481GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN 1
Chiridota_g19482
Chiridota_g19483
Chiridota_g19484RED PROTEIN IK FACTOR CYTOKINE IK
Chiridota_g19485
Chiridota_g19486
Chiridota_g19487-
Chiridota_g19488MYELIN PROTEOLIPID
Chiridota_g19489MYOTUBULARIN-RELATED
Chiridota_g1949
Chiridota_g19490GLYCOSYL TRANSFERASE
Chiridota_g19491
Chiridota_g19492CYCLINS
Chiridota_g19493ATP-BINDING TRANSPORT PROTEIN-RELATED
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