About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g19223
Chiridota_g19224
Chiridota_g19225ZGC:174356
Chiridota_g19226-
Chiridota_g19227
Chiridota_g19228
Chiridota_g19229
Chiridota_g1923
Chiridota_g19230PROTEIN CBG26694
Chiridota_g19231RNF121 PROTEIN
Chiridota_g19232SENSOR KINASE-RELATED
Chiridota_g19233SENSOR KINASE-RELATED
Chiridota_g19234
Chiridota_g19235GTP-BINDING PROTEIN 8
Chiridota_g19236
Chiridota_g19237ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED
Chiridota_g19238UBIQUITIN-CONJUGATING ENZYME E2
Chiridota_g19239
Chiridota_g1924ERGOSTEROL BIOSYNTHETIC PROTEIN 28-RELATED
Chiridota_g19240
Chiridota_g19241TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Chiridota_g19242
Chiridota_g19243
Chiridota_g19244PARANEOPLASTIC ANTIGEN
Chiridota_g19245-
Chiridota_g19246
Chiridota_g19247
Chiridota_g19248
Chiridota_g19249AMINO ACID TRANSPORTER
Chiridota_g1925L-2-HYDROXYGLUTARATE DEHYDROGENASE, MITOCHONDRIAL
Chiridota_g19250SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
Chiridota_g19251CADHERIN-87A
Chiridota_g19252MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
Chiridota_g19253SPARTIN
Chiridota_g19254CYSTEINYL-TRNA SYNTHETASE
Chiridota_g19255UNCHARACTERIZED
Chiridota_g19256TWISTER
Chiridota_g19257
Chiridota_g19258
Chiridota_g19259
Chiridota_g1926ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE
Chiridota_g19260
Chiridota_g19261
Chiridota_g19262AMINO ACID TRANSPORTER
Chiridota_g19263MUCIN-17
Chiridota_g19264N-TERMINAL ACETYLTRANSFERASE-RELATED
Chiridota_g19265
Chiridota_g19266
Chiridota_g19267
Chiridota_g19268
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