About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g19043UNCHARACTERIZED
Chiridota_g19044
Chiridota_g19045SPERIOLIN
Chiridota_g19046TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2
Chiridota_g19047WW DOMAIN BINDING PROTEIN 4
Chiridota_g19048TRANSMEMBRANE PROTEIN KIAA1109
Chiridota_g19049RAS-RELATED PROTEIN RAB
Chiridota_g1905
Chiridota_g19050PRE-MRNA CLEAVAGE COMPLEX II
Chiridota_g19051PROTEIN CBG26694
Chiridota_g19052
Chiridota_g19053REVERSE TRANSCRIPTASE
Chiridota_g19054INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g19055
Chiridota_g19056
Chiridota_g19057FI04643P-RELATED
Chiridota_g19058RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Chiridota_g19059
Chiridota_g1906SIMILAR TO CDNA SEQUENCE BC052040
Chiridota_g19060
Chiridota_g19061
Chiridota_g19062
Chiridota_g19063
Chiridota_g19064METHYLTRANSFERASE
Chiridota_g19065
Chiridota_g19066ANKYRIN REPEAT AND LEM DOMAIN-CONTAINING PROTEIN 2
Chiridota_g19067METHYLTRANSFERASE
Chiridota_g19068
Chiridota_g19069SENSOR KINASE-RELATED
Chiridota_g1907COILIN
Chiridota_g19070
Chiridota_g19071
Chiridota_g19072
Chiridota_g19073SENSOR KINASE-RELATED
Chiridota_g19074
Chiridota_g19075
Chiridota_g19076CRAMPED PROTEIN
Chiridota_g19077B-LYMPHOCYTE ANTIGEN-RELATED
Chiridota_g19078
Chiridota_g19079
Chiridota_g1908
Chiridota_g19080CYTOCHROME P450 FAMILY 3
Chiridota_g19081CYTOCHROME P450 FAMILY 3
Chiridota_g19082ACYL-MALONYL CONDENSING ENZYME-RELATED
Chiridota_g19083
Chiridota_g19084OLIGORIBONUCLEASE, MITOCHONDRIAL
Chiridota_g19085
Chiridota_g19086HIV-1 REV BINDING PROTEIN 2, 3
Chiridota_g19087THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9
Chiridota_g19088PROTEIN PHOSPHATASE METHYLESTERASE-1 RELATED
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