About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g18819PROTEIN DIAPHANOUS
Chiridota_g1882
Chiridota_g18820NXPE FAMILY MEMBER
Chiridota_g18821SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
Chiridota_g18822TUMOR NECROSIS FACTOR RECEPTOR
Chiridota_g18823
Chiridota_g18824NEDD4-BINDING PROTEIN 2
Chiridota_g18825UNCHARACTERIZED
Chiridota_g18826TRANSMEMBRANE PROTEIN 144
Chiridota_g18827RAB GDP-DISSOCIATION INHIBITOR
Chiridota_g18828
Chiridota_g18829CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR
Chiridota_g18835-OXOPROLINASE RELATED
Chiridota_g18830
Chiridota_g18831
Chiridota_g18832
Chiridota_g18833
Chiridota_g18834-
Chiridota_g18835DTDP-4-DEHYDRORHAMNOSE REDUCTASE
Chiridota_g18836
Chiridota_g18837NUCLEOPORIN
Chiridota_g18838
Chiridota_g18839FATTY ACID SYNTHASE
Chiridota_g1884INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g18840
Chiridota_g18841AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Chiridota_g18842
Chiridota_g18843
Chiridota_g18844RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Chiridota_g18845PROTEIN CBG10425
Chiridota_g18846
Chiridota_g18847
Chiridota_g18848AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Chiridota_g18849
Chiridota_g1885
Chiridota_g18850
Chiridota_g18851
Chiridota_g18852
Chiridota_g18853
Chiridota_g18854
Chiridota_g18855AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Chiridota_g18856AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Chiridota_g18857
Chiridota_g18858
Chiridota_g18859AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Chiridota_g1886ELONGATION FACTOR TU-RELATED
Chiridota_g18860AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Chiridota_g18861
Chiridota_g18862
Chiridota_g18863
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