About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g18549
Chiridota_g1855
Chiridota_g18550CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g18551
Chiridota_g18552
Chiridota_g18553
Chiridota_g18554
Chiridota_g18555
Chiridota_g18556
Chiridota_g18557
Chiridota_g18558INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g18559POLYCOMB GROUP PROTEIN
Chiridota_g1856SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN
Chiridota_g18560PRENYLTRANSFERASES
Chiridota_g18561SH3 DOMAIN-CONTAINING
Chiridota_g18562
Chiridota_g18563
Chiridota_g18564REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g18565
Chiridota_g18566STEROL DESATURASE
Chiridota_g18567
Chiridota_g18568STEROL DESATURASE
Chiridota_g18569STEROL DESATURASE
Chiridota_g1857
Chiridota_g18570
Chiridota_g18571CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g18572RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Chiridota_g18573
Chiridota_g18574
Chiridota_g18575SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Chiridota_g18576
Chiridota_g18577
Chiridota_g18578RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Chiridota_g18579BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR
Chiridota_g1858
Chiridota_g18580CYTOPLASMIC FMR1-INTERACTING PROTEIN-RELATED
Chiridota_g18581
Chiridota_g18582
Chiridota_g18583AMMONIUM TRANSPORTER
Chiridota_g18584AMMONIUM TRANSPORTER
Chiridota_g18585
Chiridota_g18586
Chiridota_g18587WD REPEAT-CONTAINING PROTEIN 55
Chiridota_g18588HSC70-INTERACTING PROTEIN
Chiridota_g18589
Chiridota_g1859
Chiridota_g18590
Chiridota_g18591SERINE/THREONINE-PROTEIN KINASE
Chiridota_g18592
Chiridota_g18593OLIGOPHRENIN 1
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