About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g18684VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 37
Chiridota_g18685FCH AND DOUBLE SH3 DOMAINS PROTEIN
Chiridota_g18686UNCHARACTERIZED
Chiridota_g18687
Chiridota_g18688
Chiridota_g18689
Chiridota_g1869
Chiridota_g18690
Chiridota_g18691PATCHED-RELATED
Chiridota_g18692PATCHED-RELATED
Chiridota_g18693
Chiridota_g18694
Chiridota_g18695PATCHED-RELATED
Chiridota_g18696
Chiridota_g18697
Chiridota_g18698
Chiridota_g18699
Chiridota_g187SECRETED MODULAR CALCIUM-BINDING PROTEIN
Chiridota_g1870(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME
Chiridota_g18700POTASSIUM CHANNEL TETRAMERIZATION DOMAIN-CONTAINING
Chiridota_g18701
Chiridota_g18702INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g18703INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Chiridota_g18704
Chiridota_g18705
Chiridota_g18706
Chiridota_g18707
Chiridota_g18708
Chiridota_g18709L1 TRANSPOSABLE ELEMENT-RELATED
Chiridota_g1871LEUCINE-RICH REPEAT-CONTAINING
Chiridota_g18710
Chiridota_g18711
Chiridota_g18712UNCHARACTERIZED
Chiridota_g18713ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE
Chiridota_g18714POTASSIUM CHANNEL, SUBFAMILY K
Chiridota_g18715POTASSIUM CHANNEL, SUBFAMILY K
Chiridota_g18716SOLUTE CARRIER FAMILY 5
Chiridota_g18717ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Chiridota_g18718DFG10 PROTEIN
Chiridota_g18719DFG10 PROTEIN
Chiridota_g1872
Chiridota_g18720
Chiridota_g18721JM1 PROTEIN
Chiridota_g18722PROGESTERONE-INDUCED BLOCKING FACTOR 1
Chiridota_g18723
Chiridota_g18724ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE
Chiridota_g18725
Chiridota_g18726
Chiridota_g18727
Chiridota_g18728
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