About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g18459
Chiridota_g1846
Chiridota_g18460SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED
Chiridota_g18461
Chiridota_g18462
Chiridota_g18463
Chiridota_g18464HEPARAN SULFATE SULFOTRANSFERASE
Chiridota_g18465
Chiridota_g18466
Chiridota_g18467SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
Chiridota_g18468SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
Chiridota_g18469
Chiridota_g1847
Chiridota_g18470RIKEN CDNA E230025N22 GENE
Chiridota_g18471CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
Chiridota_g18472REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g18473ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g18474CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g18475IQ DOMAIN-CONTAINING PROTEIN M
Chiridota_g18476UBIQUITIN-PROTEIN LIGASE E3C
Chiridota_g18477
Chiridota_g18478TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Chiridota_g18479-
Chiridota_g1848LD24721P
Chiridota_g18480
Chiridota_g18481
Chiridota_g18482PHOSPHOPANTETHEINE TRANSFERASE
Chiridota_g18483GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Chiridota_g18484
Chiridota_g18485
Chiridota_g18486
Chiridota_g18487GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Chiridota_g18488
Chiridota_g18489VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 3B
Chiridota_g1849
Chiridota_g18490
Chiridota_g18491
Chiridota_g18492SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Chiridota_g18493
Chiridota_g18494
Chiridota_g18495PIRIN-RELATED
Chiridota_g18496
Chiridota_g18497
Chiridota_g18498
Chiridota_g18499
Chiridota_g185MYOTUBULARIN-RELATED
Chiridota_g1850
Chiridota_g18500
Chiridota_g18501
Chiridota_g18502
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