About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g19269JAK PATHWAY SIGNAL TRANSDUCTION ADAPTOR MOLECULE
Chiridota_g1927REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g19270
Chiridota_g19271RHO-TYPE GTPASE ACTIVATING PROTEIN
Chiridota_g19272AGAP008170-PA
Chiridota_g19273
Chiridota_g19274
Chiridota_g19275ANTIGEN BSP, PUTATIVE-RELATED
Chiridota_g19276
Chiridota_g19277
Chiridota_g19278
Chiridota_g19279
Chiridota_g1928E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
Chiridota_g19280
Chiridota_g19281CALPAIN
Chiridota_g19282
Chiridota_g19283PROTEIN PHOSPHATASE 2C
Chiridota_g19284
Chiridota_g19285UNCHARACTERIZED
Chiridota_g19286INTERFERON ALPHA-INDUCIBLE PROTEIN 27
Chiridota_g19287INTERFERON ALPHA-INDUCIBLE PROTEIN 27
Chiridota_g19288
Chiridota_g19289
Chiridota_g1929STEERIN
Chiridota_g19290
Chiridota_g19291
Chiridota_g19292TOUCAN, ISOFORM A
Chiridota_g19293
Chiridota_g19294SMAD
Chiridota_g19295
Chiridota_g19296
Chiridota_g19297ACYL-COA SYNTHETASE
Chiridota_g19298
Chiridota_g19299ZGC:158260
Chiridota_g193
Chiridota_g1930SERUM RESPONSE FACTOR HOMOLOG
Chiridota_g19300SPERMATOGENESIS-ASSOCIATED 4-RELATED
Chiridota_g19301WD REPEAT-CONTAINING PROTEIN 17
Chiridota_g19302RETROTRANSPOSON
Chiridota_g19303
Chiridota_g19304RP42 RELATED
Chiridota_g19305CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED
Chiridota_g19306
Chiridota_g19307ORAL-FACIAL-DIGITAL SYNDROME 1 PROTEIN HOMOLOG
Chiridota_g19308STEROL REGULATORY ELEMENT-BINDING PROTEIN
Chiridota_g19309SEQUESTOSOME 1-RELATED
Chiridota_g1931
Chiridota_g19310TETRATRICOPEPTIDE REPEAT PROTEIN 29
Chiridota_g19311
Chiridota_g19312TRANSLATION INITIATION FACTOR IF-3
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