About Chiridota heheva

Chiridota heheva is a species of sea cucumber in the family Chiridotidae. The species is known from deeper regions in the Western Atlantic Ocean, but has a cosmopolitan distribution. It was described by Pawson and Vance in 2004. It occupies all three types of chemosynthetic ecosystems: hydrothermal vents, cold seeps, and organic fall. Unlike many other animals in similar environments, they do not host chemosynthetic bacteria.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Chiridota hehevaEchinodermatadeep-sea holothurianCold seep1,385-3,998Haima cold seep in the South China Sea (16° 73.228′ N, 110° 46.143′ E)2743191

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2015259v11.1GbScaffold2021JAIGNY01SYSUPRJNA75298689.62%36,527
-1.43GbChromosome2024-Institute of Deep-sea Science and Engineering, Chinese Academy of SciencesPRJNA93497294.50%32,434

References
TitleJournalPubmed ID
The genome of an apodid holothuroid (Chiridota heheva) provides insights into its adaptation to a deep-sea reducing environmentCommunications Biology35273345
A high-quality chromosomal genome assembly of the sea cucumber Chiridota heheva and its hydrothermal adaptationGigascience38171490

Gene Information

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Gene IDDescription
Chiridota_g19809
Chiridota_g1981SULFOTRANSFERASE SULT
Chiridota_g19810
Chiridota_g19811ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Chiridota_g19812TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Chiridota_g19813
Chiridota_g19814TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Chiridota_g19815ENDONUCLEASE
Chiridota_g19816
Chiridota_g19817
Chiridota_g19818
Chiridota_g19819
Chiridota_g1982NUCLEAR EXPORT MEDIATOR FACTOR NEMF
Chiridota_g19820
Chiridota_g19821
Chiridota_g19822TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Chiridota_g19823TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Chiridota_g19824
Chiridota_g19825
Chiridota_g19826
Chiridota_g19827
Chiridota_g19828
Chiridota_g19829
Chiridota_g1983ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 6
Chiridota_g19830-
Chiridota_g19831
Chiridota_g19832
Chiridota_g19833
Chiridota_g19834ARGINASE/AGMATINASE
Chiridota_g19835DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
Chiridota_g19836PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Chiridota_g19837MITOGEN-ACTIVATED PROTEIN KINASE
Chiridota_g19838SYNTENIN RELATED
Chiridota_g19839
Chiridota_g1984
Chiridota_g19840
Chiridota_g19841
Chiridota_g19842REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Chiridota_g19843
Chiridota_g19844
Chiridota_g19845
Chiridota_g19846
Chiridota_g19847
Chiridota_g19848
Chiridota_g19849CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g1985PROTEIN PHOSPHATASE
Chiridota_g19850CXC DOMAIN-CONTAINING PROTEIN-RELATED
Chiridota_g19851
Chiridota_g19852GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN
Chiridota_g19853
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