About Paraescarpia echinospica

The vestimentiferan Paraescarpia echinospica is widely distributed in the cold seeps and methane seeps of the western Pacific Ocean, and relies on their endosymbiont bacteria as a source of energy and organic carbon. It's gutless and depends entirely on its endosymbiotic sulfide-oxidizing chemoautotrophic bacteria for nutrition. Its mechanisms of host–symbiont cooperation in energy production and nutrient biosynthesis and utilization have recently been documented through a study of its endosymbiont genome and metaproteome.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paraescarpia echinospicaAnnelidadeep-sea tubewormCold seep/Hydrothermal vent1100-1600Haima cold seep in the South China Sea (16°43.80′N, 110°28.50′E)2080241

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
HKBU_Pec_v11.09GbChromosome2021JAHLWY01Hong Kong University of Science and TechnologyPRJNA62561696.40%22,642

References
TitleJournalPubmed ID
Genomic Signatures Supporting the Symbiosis and Formation of Chitinous Tube in the Deep-Sea Tubeworm Paraescarpia echinospicaMolecular Biology and Evolution34255082

Gene Information

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Gene IDDescription
PE_Scaf3736_1.13
PE_Scaf3736_1.8POLYCYSTIN FAMILY MEMBER
PE_Scaf3738_1.0
PE_Scaf3738_1.1
PE_Scaf3738_1.2
PE_Scaf3738_1.3
PE_Scaf3738_1.4
PE_Scaf3738_1.5
PE_Scaf3738_1.6
PE_Scaf3738_1.7
PE_Scaf3738_1.8
PE_Scaf3739_0.2
PE_Scaf373_0.0
PE_Scaf373_0.3
PE_Scaf3741_0.4BICAUDAL D FAMILY MEMBER
PE_Scaf3741_0.5N-TERMINAL ACETYLTRANSFERASE
PE_Scaf3741_1.4EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 12
PE_Scaf3741_1.5NUCLEOTIDE KINASE
PE_Scaf3741_2.4ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
PE_Scaf3741_3.11CHARGED MULTIVESICULAR BODY PROTEIN
PE_Scaf3741_3.12NADPH OXIDASE
PE_Scaf3741_3.24UNR PROTEIN N-RAS UPSTREAM GENE PROTEIN
PE_Scaf3741_3.25NADPH OXIDASE
PE_Scaf3741_3.28BITESIZE, ISOFORM I
PE_Scaf3742_0.2
PE_Scaf3742_0.3HYR DOMAIN-CONTAINING PROTEIN
PE_Scaf3743_0.637S RIBOSOMAL PROTEIN S26, MITOCHONDRIAL
PE_Scaf3746_0.4OS05G0521000 PROTEIN
PE_Scaf3748_0.0
PE_Scaf3748_0.4OVOCHYMASE-RELATED
PE_Scaf3749_0.0
PE_Scaf3749_1.4PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
PE_Scaf3750_0.1
PE_Scaf3750_0.11ZGC:162634
PE_Scaf3750_0.12
PE_Scaf3750_0.13MICROSOMAL DIPEPTIDASE
PE_Scaf3750_0.14MICROSOMAL DIPEPTIDASE
PE_Scaf3757_0.0
PE_Scaf3757_0.6FIVE-SPAN TRANSMEMBRANE PROTEIN M83
PE_Scaf3758_0.1ANKYRIN REPEAT DOMAIN 36-RELATED
PE_Scaf3758_1.4DEATH DOMAIN-CONTAINING PROTEIN CRADD
PE_Scaf3758_1.6DEATH DOMAIN-CONTAINING PROTEIN CRADD
PE_Scaf3758_2.2ACYL-COA DEHYDROGENASE
PE_Scaf3758_3.6RING-TYPE DOMAIN-CONTAINING PROTEIN
PE_Scaf3758_4.0
PE_Scaf3758_4.1
PE_Scaf3758_4.10AMINOMETHYLTRANSFERASE
PE_Scaf3758_4.3
PE_Scaf3758_4.4
PE_Scaf3758_5.6INHIBITOR OF GROWTH PROTEIN
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